Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_I07
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine aminope...    74   9e-14
Z95559-13|CAB09003.2|  682|Caenorhabditis elegans Hypothetical p...    29   3.4  
AL032644-7|CAA21670.1|  354|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine
           aminopeptidase protein 1 protein.
          Length = 491

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 39/98 (39%), Positives = 53/98 (54%)
 Frame = -3

Query: 564 TPTNIMXVR*XIEEACNVXKEXDIPEPCIIXGEELRARGMGGLYGVGRAASCPPALVTLS 385
           TP NI+     ++EA  V       +  +I GEEL   G GG+Y VG+A   PPA V LS
Sbjct: 179 TPANILTTDALVDEAVKVGNATG-SKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLS 237

Query: 384 YXXXXXARTVAWVGKGIVXDTGGLSIKARVRTASLSRN 271
           +        +A VGKG+V DTGGL IK +    ++ R+
Sbjct: 238 HEVPGSTEHIALVGKGVVYDTGGLQIKTKTGMPNMKRD 275


>Z95559-13|CAB09003.2|  682|Caenorhabditis elegans Hypothetical
           protein Y41E3.1a protein.
          Length = 682

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 340 GHRVXHRRPQHQGEGAHRQPFSQLFFPTLLR 248
           GHR    R  HQG+   R PF  +  P  LR
Sbjct: 425 GHRFAKLRDTHQGQLEERMPFFSISLPKQLR 455


>AL032644-7|CAA21670.1|  354|Caenorhabditis elegans Hypothetical
           protein Y51H1A.7 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 242 QGSQQGRKKKLRERLAVRTLALMLRPPVSYTMPFPTQ 352
           QG QQ R + LRE+  +R      +PPV+   P P +
Sbjct: 195 QGQQQSRLQMLREQTLLRAPLEEEKPPVATMAPVPDE 231


>Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical
           protein W07G4.4 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 429 VGRAASC----PPALVTLSYXXXXXAR-TVAWVGKGIVXDTGGLSIK 304
           V RAA+C       L+ L Y      + T   VGKG+  DTGG  +K
Sbjct: 237 VNRAANCVKEHQARLIRLEYVGEGETQDTFFVVGKGVTIDTGGCDLK 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,462,003
Number of Sequences: 27780
Number of extensions: 175894
Number of successful extensions: 366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)