Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I05
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.64
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.64
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 6.0
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.9
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/79 (24%), Positives = 21/79 (26%)
Frame = +3
Query: 450 PPXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXP 629
PP PP +T P P P P P P P P P
Sbjct: 444 PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 503
Query: 630 XPXXXXPLPPXRXXPPXXP 686
+PP PP P
Sbjct: 504 PIATPSSVPPPPPPPPPPP 522
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/92 (23%), Positives = 22/92 (23%)
Frame = +3
Query: 453 PXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXPX 632
P PP P P P P P P P P P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPP 321
Query: 633 PXXXXPLPPXRXXPPXXPXXXXXXXXPXXXPP 728
P P PP P P PP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +3
Query: 450 PPXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXP 629
PP PP P P P P P P P P P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 630 XPXXXXPLPPXRXXPPXXP 686
P P PP R PP P
Sbjct: 359 GPGMYPPPPPSR--PPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/92 (23%), Positives = 22/92 (23%)
Frame = +3
Query: 453 PXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXPX 632
P PP P P P P P P P P P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPP 331
Query: 633 PXXXXPLPPXRXXPPXXPXXXXXXXXPXXXPP 728
P P PP P P PP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +3
Query: 450 PPXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXP 629
PP PP P P P P P P P P P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 630 XPXXXXPLPPXRXXPPXXP 686
P P PP R PP P
Sbjct: 369 GPGMYPPPPPSR--PPAPP 385
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/76 (23%), Positives = 20/76 (26%)
Frame = +3
Query: 450 PPXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXP 629
PP PP +T P P P P P P P P P
Sbjct: 437 PPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 496
Query: 630 XPXXXXPLPPXRXXPP 677
+PP PP
Sbjct: 497 PIATPSSVPPPPPPPP 512
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/73 (24%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Frame = +3
Query: 462 PPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXPXXXPXXXPXXXPXPXP-X 638
PP P P P P P P P P P P P P
Sbjct: 178 PPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVE 237
Query: 639 XXXPLPPXRXXPP 677
P PP + P
Sbjct: 238 PSDPAPPSKLPSP 250
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 466 PXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXP 597
P P PPP P T P P P PP P P P
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPLPVP---PPPPLFSPSMILPPPPP 1394
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXP 537
PP P PPP P T P P P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPP 1362
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXP 612
PP P PPP +A P P P PP P P P P
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPP---PPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXP 612
PP P PPP +A P P P PP P P P P
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPP---PPPPMGLPAVGAGAPPPPPPPP 482
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 1/76 (1%)
Frame = +3
Query: 450 PPXXPPXXXPXXXXXXPXXNTNRPXXPXPXXXXXXXXPXPXXXXXP-XXXPXXXPXXXPX 626
PP PP P T P P P P P P P P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASY 87
Query: 627 PXPXXXXPLPPXRXXP 674
P P PP P
Sbjct: 88 PQNAVPVPAPPPAPYP 103
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXP 591
PP P PPP P + P P P PP P P
Sbjct: 85 PPAPLPPPPPPASPCCGPS-PVPAPCCPPPPAPAAPCCPPPPP 126
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +1
Query: 466 PXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXPXXXPXXXXXXX 645
P P PPP P P P P PP P P P P P
Sbjct: 27 PPPCPPPPPPMC--APPPLPCPPPPICPP--QFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Query: 646 XXSPXXAXXP 675
SP + P
Sbjct: 83 SYSPCQSYAP 92
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = -2
Query: 675 GGXXXXGGXGAXXXGXXXGXXGGXXXGXXXXXXXGWXXGXXXXXAXXXGXWXG 517
G GG G G G GG G GW G W G
Sbjct: 85 GSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGG 137
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/72 (22%), Positives = 18/72 (25%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXPXXXPXXXXXX 642
PP P PP P + + P P PP P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 643 XXXSPXXAXXPP 678
P PP
Sbjct: 297 PPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/72 (22%), Positives = 18/72 (25%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXPXXXPXXXXXX 642
PP P PP P + + P P PP P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 643 XXXSPXXAXXPP 678
P PP
Sbjct: 318 PPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/72 (22%), Positives = 18/72 (25%)
Frame = +1
Query: 463 PPXPXPPPXXPXXXXTXTAXPXPXPXXXPPXXXXXPXXXXXXPXPXXXXPXXXPXXXXXX 642
PP P PP P + + P P PP P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 643 XXXSPXXAXXPP 678
P PP
Sbjct: 303 PPPPPPPRGSPP 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,906,924
Number of Sequences: 27780
Number of extensions: 121277
Number of successful extensions: 761
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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