Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I03
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.16
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 0.18
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.49
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.49
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.49
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.86
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.86
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 1.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 1.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 1.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 1.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.0
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.6
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 6.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 6.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 6.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 633 GXXXPXFFXGGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G P GG PPPP PPPP G PPP
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -3
Query: 633 GXXXPXFFXGGGXPPPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKGXXV 454
G P GG PPPP PPPP G PPP F PPP G V
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF------GAPPPPPPPSGLGV 125
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 591 PPPXKXXXFXPPPPXGGXXPPPXFF 517
PPP PPP GG PPP F
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMF 90
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 588 PPXKXXXFXPPPPXGGXXPPPXFFF 514
PP F PPPP G PPP F
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMF 90
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXGGXXPPP 526
GG PPPP PPPP G P
Sbjct: 102 GGIPPPPPMFGAPPPPPPPSGLGVAP 127
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPP 526
G PPPP PPPP GG PPP
Sbjct: 270 GSPPPPPTGSP--PPPPAGGSPPPP 292
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKG 463
G PPPP PPPP G PPP PPP +G
Sbjct: 262 GSPPPPRTGSP--PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXG----GXXPPP 526
GG PPPP PPPP G G PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP PPP G PPP
Sbjct: 251 GSGSPPPPPAAGS-PPPPRTGSPPPPP 276
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Frame = -3
Query: 606 GGGXPPPPXKXXX------FXPPPPXGGXXPPP 526
G PPPP K PPPP G PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = -3
Query: 600 GXPPPPXKXXXFXP----PPPXGGXXPPP 526
G PPPP P PPP G PPP
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPP 526
G PPPP PPPP GG PPP
Sbjct: 291 GSPPPPPTGSP--PPPPAGGSPPPP 313
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKG 463
G PPPP PPPP G PPP PPP +G
Sbjct: 283 GSPPPPRTGSP--PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXG----GXXPPP 526
GG PPPP PPPP G G PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP PPP G PPP
Sbjct: 272 GSGSPPPPPAAGS-PPPPRTGSPPPPP 297
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Frame = -3
Query: 606 GGGXPPPPXKXXX------FXPPPPXGGXXPPP 526
G PPPP K PPPP G PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = -3
Query: 600 GXPPPPXKXXXFXP----PPPXGGXXPPP 526
G PPPP P PPP G PPP
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPP 526
G PPPP PPPP GG PPP
Sbjct: 276 GSPPPPPTGSP--PPPPAGGSPPPP 298
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKG 463
G PPPP PPPP G PPP PPP +G
Sbjct: 268 GSPPPPRTGSP--PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXG----GXXPPP 526
GG PPPP PPPP G G PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP PPP G PPP
Sbjct: 257 GSGSPPPPPAAGS-PPPPRTGSPPPPP 282
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Frame = -3
Query: 606 GGGXPPPPXKXXX------FXPPPPXGGXXPPP 526
G PPPP K PPPP G PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = -3
Query: 600 GXPPPPXKXXXFXP----PPPXGGXXPPP 526
G PPPP P PPP G PPP
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 33 PPPPPKGTGTPPPPPTG 49
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 64 PPPPPKGTGTPPPPPTG 80
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 96 PPPPPKGTGTPPPPPTG 112
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 127 PPPPPKGTGSPPPPPTG 143
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 158 PPPPPKGTGSPPPPPTG 174
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 189 PPPPPKGTGTPPPPPTG 205
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPPP G
Sbjct: 251 PPPPPKGTGSPPPPPTG 267
Score = 24.6 bits (51), Expect(2) = 1.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXG 544
PPPP K PPP G
Sbjct: 220 PPPPPKGTGSPTPPPTG 236
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 65 PPPPKGTGTPPP 76
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 97 PPPPKGTGTPPP 108
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 128 PPPPKGTGSPPP 139
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 159 PPPPKGTGSPPP 170
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 190 PPPPKGTGTPPP 201
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 252 PPPPKGTGSPPP 263
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G PPP
Sbjct: 283 PPPPKGTGTPPP 294
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3
Query: 561 PPPPXGGXXPPP 526
PPPP G P P
Sbjct: 221 PPPPKGTGSPTP 232
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPP-------XGGXXPPPXFFFFXXXXKKXXXXPPPXKGXXVXKK 445
GG PPPP PPPP GG PPP F PP K V
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Query: 444 KKXXP 430
+ P
Sbjct: 816 MRKFP 820
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
Frame = -3
Query: 603 GGXPPPPX-------KXXXFXPPPPXGGXXPPP 526
GG PPPP PPPP GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 603 GGXPPPPXKXXXFX--PPPPXGGXXPP 529
GG PPPP PPPP G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Frame = -3
Query: 606 GGGXPP---PPXKXXXFXPPPPXG-----GXXPPPXFFFFXXXXKKXXXXPPPXKGXXVX 451
GG PP PP PPPP G G PPP PPP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 450 KKKKXXPXXKKGG 412
P KGG
Sbjct: 771 PPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPP-------XGGXXPPPXFFFFXXXXKKXXXXPPPXKGXXVXKK 445
GG PPPP PPPP GG PPP F PP K V
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Query: 444 KKXXP 430
+ P
Sbjct: 816 MRKFP 820
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
Frame = -3
Query: 603 GGXPPPPX-------KXXXFXPPPPXGGXXPPP 526
GG PPPP PPPP GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 603 GGXPPPPXKXXXFX--PPPPXGGXXPP 529
GG PPPP PPPP G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Frame = -3
Query: 606 GGGXPP---PPXKXXXFXPPPPXG-----GXXPPPXFFFFXXXXKKXXXXPPPXKGXXVX 451
GG PP PP PPPP G G PPP PPP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 450 KKKKXXPXXKKGG 412
P KGG
Sbjct: 771 PPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPP-------XGGXXPPPXFFFFXXXXKKXXXXPPPXKGXXVXKK 445
GG PPPP PPPP GG PPP F PP K V
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 398
Query: 444 KKXXP 430
+ P
Sbjct: 399 MRKFP 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
Frame = -3
Query: 603 GGXPPPPX-------KXXXFXPPPPXGGXXPPP 526
GG PPPP PPPP GG PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 603 GGXPPPPXKXXXFX--PPPPXGGXXPP 529
GG PPPP PPPP G PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Frame = -3
Query: 606 GGGXPP---PPXKXXXFXPPPPXG-----GXXPPPXFFFFXXXXKKXXXXPPPXKGXXVX 451
GG PP PP PPPP G G PPP PPP G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 450 KKKKXXPXXKKGG 412
P KGG
Sbjct: 354 PPPPPPPGGFKGG 366
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP F PPPP PPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPP 68
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP F PPPP PPP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPP 77
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP + PPP G PP
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP + PPP G PP
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 591 PPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKG 463
PPP F PPPP G PPP F PPP G
Sbjct: 290 PPPF---GFFPPPPRGHFPPPPP-HFMGRGMPPPFMPPPPHFG 328
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 591 PPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPPXKG 463
PPP F PPPP G PPP F PPP G
Sbjct: 290 PPPF---GFFPPPPRGHFPPPPP-HFMGRGMPPPFMPPPPHFG 328
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP PPPP PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP PPPP PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPP 529
G PPP PPPP GG PP
Sbjct: 1590 GGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXGGXXPPPXFFFFXXXXKKXXXXPPP 472
GG PPP PPP GG PPP PPP
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGG--PPPRLGMPPPGPPPPNGGPPP 1612
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP PPPP PPP
Sbjct: 254 PPPPCPMPIPCPPPPPACSCPPP 276
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP PP G PPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPP 792
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXGGXXPPP 526
G PPPP PP GG PPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGGIPPPP 793
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
P PP PPPP G PPP
Sbjct: 780 PLPPRLQGGIPPPPPLGIIPPPP 802
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 600 GXPPPPXKXXX--FXPPP---PXGGXXPPPXFF 517
G PPPP F PPP P G PPP F
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF 397
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPP---PXGGXXPP 529
GG PPPP + PPP P G PP
Sbjct: 431 GGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXGGXXPPP 526
GG P PP PPP PPP
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPPPP 145
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP P P GG PPP
Sbjct: 30 GCGAPPPPPACAP-PPAPACGGGAPPP 55
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
G G PPPP PP G PPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPP 792
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 603 GGXPPPPXKXXXFXPPPPXGGXXPPP 526
G PPPP PP GG PPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGGIPPPP 793
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
P PP PPPP G PPP
Sbjct: 780 PLPPRLQGGIPPPPPLGIIPPPP 802
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP PPPP G P P
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPPP 526
PPPP PPPP G P P
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGP 320
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 600 GXPPPPXKXXXFXPPPPXGGXXPPPXFFF 514
G PPP + PPP G PPP ++
Sbjct: 75 GGPPPHHQYHLQYPPPHGLGPPPPPPHYY 103
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGG 541
G G PPPP PPPP G
Sbjct: 92 GLGPPPPPPHYYTQPPPPPQSG 113
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPP 529
PPPP + PPPP PP
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPP 153
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 606 GGGXPPPPXKXXXFXPPPPXGGXXPPP 526
GGG P PPPP G PPP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPP 53
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 591 PPPXKXXXFXPPPPXGGXXPPP 526
PPP + P PP G PPP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPP 728
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 621 PXFFXGGGXPPPPXKXXXFXPPPPXGGXXPPP 526
P G PPPP PPP GG PPP
Sbjct: 569 PQNLSGAPPPPPP-------PPPMLGGPPPPP 593
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 594 PPPPXKXXXFXPPPPXGGXXPP 529
PPPP PPPP GG P
Sbjct: 581 PPPPMLGGPPPPPPPPGGLMGP 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,225,954
Number of Sequences: 27780
Number of extensions: 195716
Number of successful extensions: 1118
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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