Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I01
(812 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.021
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.036
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.048
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.084
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.15
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.34
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.59
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.79
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 1.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 7.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 7.3
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 4e-04
Identities = 34/138 (24%), Positives = 40/138 (28%)
Frame = +3
Query: 384 PXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTP 563
P P P S PP + AP PP + P P P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 564 XPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXPXXXSPPXXXXXRPXASPPXXXXS 743
P P P+P P PS P +PP P +PP S
Sbjct: 1093 PVPKPS---VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV---PSGAPPVPKPS 1146
Query: 744 XXSXAXRXPSPAPXSXXP 797
+ PS AP P
Sbjct: 1147 VAAPPVPAPSGAPPVPKP 1164
Score = 39.1 bits (87), Expect = 7e-04
Identities = 37/140 (26%), Positives = 44/140 (31%), Gaps = 2/140 (1%)
Frame = +3
Query: 384 PXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPP--HPPXXXXPXX 557
P RP R P P A P PP + PP HPP P
Sbjct: 945 PTKLTRPSNDGRKASGPRP-----AAPPSIPPPLPVSNILSSPTSEPPKDHPPSA--PLS 997
Query: 558 TPXPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXPXXXSPPXXXXXRPXASPPXXX 737
P P P+P S P PS A +PP P ++PP
Sbjct: 998 KPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI---PTSTPPVPK 1054
Query: 738 XSXXSXAXRXPSPAPXSXXP 797
S + + P PAP S P
Sbjct: 1055 SSSGAPSAPPPVPAPSSEIP 1074
Score = 35.5 bits (78), Expect = 0.009
Identities = 31/133 (23%), Positives = 38/133 (28%), Gaps = 4/133 (3%)
Frame = +1
Query: 418 ARPXXLPRSXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPSX 597
A P +P S P P + P P++P P P P
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI--PSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 598 ---AXPXXXXXXXXPXXPXPPX-PPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPG 765
A P P P P PP+ PP + P P P P PA G
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 766 PPXXLRXPXXXPP 804
P + PP
Sbjct: 1158 APPVPKPSVAAPP 1170
Score = 33.9 bits (74), Expect = 0.028
Identities = 32/131 (24%), Positives = 39/131 (29%), Gaps = 2/131 (1%)
Frame = +1
Query: 418 ARPXXLPRSXGTSPXLLVA-PPXSAXXXPPXXXXXTPPTLPXXXXLRX-RPXPQSXASXP 591
A P +P P VA PP A P + P P P+ A P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 592 SXAXPXXXXXXXXPXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGPP 771
P P PP PP S +P P + +P P P P PA
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP---SAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 772 XXLRXPXXXPP 804
+ P P
Sbjct: 1247 PSVSTPRSSVP 1257
Score = 31.9 bits (69), Expect = 0.11
Identities = 37/156 (23%), Positives = 42/156 (26%), Gaps = 2/156 (1%)
Frame = +3
Query: 318 GXRTRXXGXAPPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXX 497
G R PP P P AP S P A R PP +
Sbjct: 960 GPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPP-VPKLS 1018
Query: 498 PXXVXXPXPP-HPPXXXXPXXTPXPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXP 674
P P P P P PIP P+P S P P P + P
Sbjct: 1019 SKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP----PVPKSSSGAPSAPPPVPAPSSEIP 1074
Query: 675 XXXSPP-XXXXXRPXASPPXXXXSXXSXAXRXPSPA 779
+P P PP S + PS A
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVA 1110
Score = 31.5 bits (68), Expect = 0.15
Identities = 34/131 (25%), Positives = 39/131 (29%), Gaps = 2/131 (1%)
Frame = +1
Query: 415 GARPXXLPRSXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPS 594
GA P +P G P V P A P PP +P P P+ + P
Sbjct: 1081 GAPP--VPAPSGIPP---VPKPSVAAPPVPKPSVAVPP-VPAPSGAP--PVPKPSVAAPP 1132
Query: 595 XAXPXXXXXXXXPXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPP--PXXXXPXXPAXPGP 768
P P PP P S +P P A VP P P P P
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 769 PXXLRXPXXXP 801
P P P
Sbjct: 1193 PPSEAPPVPKP 1203
Score = 29.9 bits (64), Expect = 0.45
Identities = 42/165 (25%), Positives = 46/165 (27%), Gaps = 12/165 (7%)
Frame = +3
Query: 345 APPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRP-PGIXXXX-PXXVXXP 518
APP P AP PP AP P P + P P
Sbjct: 1062 APPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 519 XPPHPPXXXXPXXTPX--PPIPGXXXFXXXPLPXXPSXRXXRPXPS------PXAAQXXP 674
P P P P PP+P P+P PS P PS P + P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVP-KPSVAAPPVPA-PSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 675 XXXSPPXXXXXRPXAS--PPXXXXSXXSXAXRXPSPAPXSXXPXA 803
P P S PP S PS AP P A
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA 1224
Score = 26.2 bits (55), Expect = 5.5
Identities = 18/68 (26%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +2
Query: 488 PXP-PXXXXXPXPPPPSXXXXPXXNAXXPNPXXPXLPXXSPXXXPXXPXLSXPXLPXRRS 664
P P P P PPP P P+ P +P S P P +P +
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVP-----KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 665 VXPPXXXP 688
PP P
Sbjct: 1235 KAPPVPAP 1242
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/80 (31%), Positives = 29/80 (36%)
Frame = +2
Query: 455 RXGSSSPPRXXPXPPXXXXXPXPPPPSXXXXPXXNAXXPNPXXPXLPXXSPXXXPXXPXL 634
R +S+PPR PP P PP P + P P P P SP P P
Sbjct: 138 RPPTSAPPRPSIPPPS----PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA 193
Query: 635 SXPXLPXRRSVXPPXXXPPV 694
P P + PP PV
Sbjct: 194 VPPMPP--KVPPPPLSQAPV 211
Score = 29.5 bits (63), Expect = 0.59
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 2/97 (2%)
Frame = +1
Query: 472 APPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXXXXXPXXPXPP 651
A P SA P PPT P P S PS A P P PP
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI-------PSSLPPP 174
Query: 652 XPPLSXSPXXXPPRX--LAXXVPXXPPPXXXXPXXPA 756
P + P PP L VP PP P A
Sbjct: 175 AQPAA--PVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Score = 29.1 bits (62), Expect = 0.79
Identities = 19/82 (23%), Positives = 22/82 (26%)
Frame = +3
Query: 375 PXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPX 554
P P P R P S PP +P P I P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 555 XTPXPPIPGXXXFXXXPLPXXP 620
P +P +P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/101 (24%), Positives = 29/101 (28%)
Frame = +1
Query: 442 SXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXX 621
S +P APP P P++P P P PS P
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP----- 173
Query: 622 XXXPXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXP 744
P P P P PP + VP PPP P
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPP--MPPKVP--PPPLSQAP 210
Score = 27.9 bits (59), Expect = 1.8
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Frame = +1
Query: 583 SXPSXAXPXXXXXXXXPXXPXPPXPPLSXSPXXXPP-RXLAXXVPXXPPPXXXXPXXPAX 759
S P+ P P P PP SP PP A +P PP P PA
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPP--PSPASAPPIPSKAPPIPSSLPP----PAQPAA 179
Query: 760 P--GPPXXLRXPXXXPP 804
P PP P PP
Sbjct: 180 PVKSPPSAPSLPSAVPP 196
Score = 25.8 bits (54), Expect = 7.3
Identities = 25/122 (20%), Positives = 31/122 (25%)
Frame = +1
Query: 328 PGXGXXPPXXXPXXXXPXXXXXXXXXXXPGARPXXLPRSXGTSPXLLVAPPXSAXXXPPX 507
P PP P P A+P +S ++P L A P PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 508 XXXXTPPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXXXXXPXXPXPPXPPLSXSPXXXP 687
P P + S + P PP PP S P
Sbjct: 205 PLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPSSYVLQQRP 264
Query: 688 PR 693
R
Sbjct: 265 NR 266
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 420 APPSPPPXXGXVAXAPRRP 476
APP PPP A AP P
Sbjct: 4 APPPPPPAPAPAAAAPAPP 22
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.021
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 417 RAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIP 578
++PP PPP AP P + P P PP PP P PP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.084
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 465 PRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIPGXXXFXXXPLPXXP 620
P PP + P P PP P P P PP PG P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 348 PPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPP 479
PP P P P PP PPP G P PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 631 PXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPPP 729
P PP P + P PP +A P PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = +1
Query: 631 PXXPXP----PXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGPP 771
P P P P P + P P + P PPP P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 384 PXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPP 479
P P P PP PPP P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/50 (28%), Positives = 15/50 (30%), Gaps = 3/50 (6%)
Frame = +2
Query: 488 PXPPXXXXXPXPPP---PSXXXXPXXNAXXPNPXXPXLPXXSPXXXPXXP 628
P PP P P P P P P P P + P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.036
Identities = 35/132 (26%), Positives = 40/132 (30%)
Frame = +3
Query: 417 RAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIPGXXXFX 596
R PP PPP + R P I P PP PP P PP
Sbjct: 310 RPPPPPPP-----SRRNRGKPPIGNGSSNSSLPPPPP-PPRSNAAGSIPLPPQGRSAPPP 363
Query: 597 XXPLPXXPSXRXXRPXPSPXAAQXXPXXXSPPXXXXXRPXASPPXXXXSXXSXAXRXPSP 776
P + R P S A P +PP R ++P S P P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPP---APPPAIPGR--SAPALPPLGNASRTSTPPVP 418
Query: 777 APXSXXPXAXXS 812
P S P A S
Sbjct: 419 TPPSLPPSAPPS 430
Score = 32.7 bits (71), Expect = 0.064
Identities = 36/157 (22%), Positives = 41/157 (26%), Gaps = 12/157 (7%)
Frame = +3
Query: 291 NFXKRXEXKGXRTRXXGXAPPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPR 470
+F K + T APP P P PP PPP G V+ P
Sbjct: 211 DFVKAYLNESAGTPTSTSAPPIPPSIPSSRPPERVPS-LSAPAPPPIPPPSNGTVSSPPN 269
Query: 471 RPP---GIXXXXPXXVXXPXPPHPP---------XXXXPXXTPXPPIPGXXXFXXXPLPX 614
PP P PP PP P PP P P+
Sbjct: 270 SPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGN 329
Query: 615 XPSXRXXRPXPSPXAAQXXPXXXSPPXXXXXRPXASP 725
S P P P + PP P P
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 32.3 bits (70), Expect = 0.084
Identities = 35/132 (26%), Positives = 39/132 (29%), Gaps = 7/132 (5%)
Frame = +3
Query: 345 APPXXXXXXXPXXPXXXPRPXXXXRA---PPSPPPXXGXVAXAPRRPP----GIXXXXPX 503
APP P P P RA PP+PPP + AP PP P
Sbjct: 360 APPPPPPRSAPSTGRQPP-PLSSSRAVSNPPAPPPAIPGRS-APALPPLGNASRTSTPPV 417
Query: 504 XVXXPXPPHPPXXXXPXXTPXPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXPXXX 683
PP P P P P+ PLP P P A P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAP---AAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 684 SPPXXXXXRPXA 719
+PP P A
Sbjct: 475 APPPAPAPAPAA 486
Score = 31.5 bits (68), Expect = 0.15
Identities = 25/110 (22%), Positives = 32/110 (29%)
Frame = +1
Query: 475 PPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXXXXXPXXPXPPX 654
P ++ PP + + + RP P S + P P PP
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Query: 655 PPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGPPXXLRXPXXXPP 804
PP S + P P PPP P P PP PP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAP-PPPPPRSAPSTGRQP-PPLSSSRAVSNPP 389
Score = 31.1 bits (67), Expect = 0.19
Identities = 27/94 (28%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +1
Query: 499 PPXXXXXTPPTLPXXXXLRXRPXPQ--SXASXPSXAXPXXXXXXXXPXXPX--PPXPPLS 666
PP + P LP P + S P A P P P P PPL
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLP 450
Query: 667 XSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGP 768
S PP L +P PP P P P P
Sbjct: 451 PSAPIAPP--LPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.9 bits (64), Expect = 0.45
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +3
Query: 345 APPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXP 524
APP P P P + P PP + AP PP P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Query: 525 P 527
P
Sbjct: 487 P 487
Score = 29.5 bits (63), Expect = 0.59
Identities = 24/92 (26%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +3
Query: 522 PPHPPXXXXPXXTPXPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXPXXXSPPXXX 701
PP PP P P +P P+P + P SP P +P
Sbjct: 230 PPIPPSI--PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP-IAPVSMNPAINS 286
Query: 702 XXRPXASPPXXXXSXXSXA---XRXPSPAPXS 788
+P PP S + A R P P P S
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPPPS 318
Score = 29.5 bits (63), Expect = 0.59
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +1
Query: 412 PGARPXXLP---RSXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXA 582
PG LP + TS + PP PP PP+LP P P S
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-PLPPSAP 454
Query: 583 SXPSXAXPXXXXXXXXPXXPXPPXPP 660
P P P PP P
Sbjct: 455 IAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 4/80 (5%)
Frame = +2
Query: 425 PXXSPXLXXRRXGSSSPPRXXPXPPXXXXXPXPPPPSXXXXPXXNAXXPN----PXXPXL 592
P +P S PP P P P PPS P A P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 593 PXXSPXXXPXXPXLSXPXLP 652
P +P P P S LP
Sbjct: 476 PPPAPAPAPAAPVASIAELP 495
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/70 (28%), Positives = 24/70 (34%)
Frame = +2
Query: 467 SSPPRXXPXPPXXXXXPXPPPPSXXXXPXXNAXXPNPXXPXLPXXSPXXXPXXPXLSXPX 646
S+PP P P PP + P P P LP +P P P + P
Sbjct: 386 SNPPAPPPAIPGRSAPALPP----LGNASRTSTPPVPTPPSLPPSAP---PSLPPSAPPS 438
Query: 647 LPXRRSVXPP 676
LP PP
Sbjct: 439 LPMGAPAAPP 448
Score = 27.9 bits (59), Expect = 1.8
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 5/115 (4%)
Frame = +1
Query: 472 APPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXXXXXPXXPXPP 651
APP P PP P + + A P P P
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 652 XP--PLSXSPXXXP--PRXLAXXVPXXPPPXXXXPXXPAXP-GPPXXLRXPXXXP 801
P P S P P P L P PP P P P G P P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 27.5 bits (58), Expect = 2.4
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +2
Query: 515 PXPPPPSXXXXPXXNAXXPNPXXPX---LPXXSPXXXPXXPXLSXPXLPXRRSVXPPXXX 685
P PPPP P NA P P P P P L R+V P
Sbjct: 337 PPPPPP-----PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 686 PPVXXXXXSXXXPP 727
PP + PP
Sbjct: 392 PPAIPGRSAPALPP 405
Score = 27.1 bits (57), Expect = 3.2
Identities = 31/134 (23%), Positives = 35/134 (26%), Gaps = 4/134 (2%)
Frame = +1
Query: 412 PGARPXXLPRSXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLPXXXXLRXRPXPQSXASXP 591
P P R+ G P + S PP ++P R P P S P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 592 SXAX--PXXXXXXXXPXXPXPPXPPLSXSPXXXPPRXLA--XXVPXXPPPXXXXPXXPAX 759
S P P PP S PP A P P P P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 760 PGPPXXLRXPXXXP 801
P P P
Sbjct: 431 LPPSAPPSLPMGAP 444
Score = 26.6 bits (56), Expect = 4.2
Identities = 24/96 (25%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +1
Query: 523 PPTLPXXXXLRXRPXPQSXASXPSXAXPXXXXXXXXPXXPXPPXPPLSXSPXXXPPRXLA 702
PP P R +P + +S S P P PP S PP A
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI--PLPPQGRSAPPPPPPRSA 369
Query: 703 XXVPXXPPPXXXXPXXPAXPGPPXXL--RXPXXXPP 804
PPP P PP + R PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.048
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 640 PXPPXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGP 768
P PP PP+S P P A P PPP P+ P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGP-PSAPPPPLPASSAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +2
Query: 455 RXGSSSPPRXXPXPPXXXXXPXPPPPSXXXXPXXNAXXPNPXXPXLPXXSPXXXP 619
R S++PP+ P PPPPS P A P+ P LP S P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP---AGPPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.26
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 423 PPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIP 578
P S PP A P+ P V P P PP P P PP+P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 432 PPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIP 578
PP VA + PG+ P P PP P P P P+P
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPP-APVSQLPPAVPNVPVP 1495
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = +2
Query: 419 RAPXXSPXLXXRRXGSSSPPRXXPXPPXXXXXPXPPPPS-XXXXPXXNAXXPNPXXPXLP 595
R+ + L + G +P PP PP S P + P P P +P
Sbjct: 1665 RSSKDAAALAAKLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Query: 596 XXSP-XXXPXXPXLSXPXLP 652
P P P S P +P
Sbjct: 1725 AGPPSAPPPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 631 PXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGP 768
P P PP +P PP P PP P P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +3
Query: 453 VAXAPRRPPGIXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIPGXXXFXXXPLPXXPSXRX 632
V+ P RP P + P PP PP P + P G PLP +
Sbjct: 1687 VSTPPVRPQSAA---PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSV 1743
Query: 633 XRP 641
P
Sbjct: 1744 PNP 1746
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 330 RXXGXAPPXXXXXXXPXXPXXXPRP---XXXXRAPPSPPPXXGXVAXAPRRP-PG 482
R APP P P P P PPS PP + AP P PG
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 25.4 bits (53), Expect = 9.7
Identities = 27/126 (21%), Positives = 31/126 (24%), Gaps = 2/126 (1%)
Frame = +3
Query: 348 PPXXXXXXXPXXPXXXPRPXXXXRAPPSPPPXXGXVAXAPRRPPGIXXXXPXXVXXPXPP 527
PP P P P AP S P V+ P P + PP
Sbjct: 1448 PPAPMHAVAPVQPKA-PGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPP 1506
Query: 528 HPPXXXXPXXTPXPPIPGXXXFXXXPLPXXPSXRXXRPXPSPXAAQXXPXXXSP--PXXX 701
+ PP P P P S A P SP P
Sbjct: 1507 SSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPYAPQEP 1566
Query: 702 XXRPXA 719
+P A
Sbjct: 1567 VQKPQA 1572
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 418 ARPXXLPRSXGTSPXLLVAPPXSAXXXPPXXXXXTPPTLP 537
A P + P + V PP SA P PP LP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.084
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 627 GXXGXXXGXXXGRXGXXGLGXXAXXXGXXXXEGGGGXGXXXXXGGXGXXRGG 472
G G G GR G G G G GGG G GG G RGG
Sbjct: 6 GSRGGRGGSRGGRGGFNG-GRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 32.3 bits (70), Expect = 0.084
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = -3
Query: 657 RXGRXGXX--RXGXXGXXXGXXXGRXGXXGLGXXAXXXGXXXXEGGGGXGXXXXXGGXGX 484
R GR G R G G G GR G G G G GG G GG G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARG-GGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 483 XRGG 472
+GG
Sbjct: 67 AKGG 70
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 535 GGWGGX--GXXTXXGXXXXXPGGRRGAXATXPKXGGGXGGARXXXXGRGXXXGXXG 374
GG GG G G GGR GA GGG GGAR GRG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGAR------GGGRGGARGGRGGRGGARGGRG 58
Score = 29.9 bits (64), Expect = 0.45
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = -2
Query: 571 GGXGVXXGXXXXGGWGGXGXXTXXGXXXXXPGGRRGAXATXPKXGGGXGGARXXXXGRGX 392
GG G G GG+ G G GGR GA GG GG GRG
Sbjct: 9 GGRGGSRGGR--GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 391 XXG 383
G
Sbjct: 67 AKG 69
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 577 GIGGXGVXXGXXXXGGWGGXGXXTXXGXXXXXPGGRRGAXATXPKXGGGXGGAR 416
G GG G G GG GG G G R G + GG GGA+
Sbjct: 24 GRGGFGGGRGGARGGGRGGA-----RGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 631 PXXPXPPXPPLSXSPXXXPPRXLAXXVPXXPPPXXXXPXXPAXPGPP 771
P P P PPL P P +P P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 516 PXPPHPPXXXXPXXTPXPPIPGXXXFXXXPLPXXP 620
P P PP P P P+PG P+P P
Sbjct: 102 PLPREPPLPNEP--VPEEPLPGEPPLPDEPVPEEP 134
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.34
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = -2
Query: 652 GEGWGRXXRXXGXXGRGXXXKXXXPGIGGXGVXXGXXXXGGWGGXGXXTXXGXXXXXPGG 473
G G+G G G G GG G G G G G G PGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 472 RRGAXATXPKXGGGXGGARXXXXGRG 395
G GG GG G G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.59
Identities = 29/92 (31%), Positives = 29/92 (31%), Gaps = 4/92 (4%)
Frame = -2
Query: 637 RXXRXXGXXGRGXXXKXXXPGIGGXGVXXGXXXXG----GWGGXGXXTXXGXXXXXPGGR 470
R G G G PG GG G G G G GG G G PGG
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGF 240
Query: 469 RGAXATXPKXGGGXGGARXXXXGRGXXXGXXG 374
G GGG GG G G G G
Sbjct: 241 GGGPG---GFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.5 bits (63), Expect = 0.59
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 651 GRXGXXRXGXXGXXXGXXXGRXGXXGLGXXAXXXGXXXXEGGGGXGXXXXXGGXGXXRGG 472
G G G G G G G G G GG G G GG G GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.5 bits (63), Expect = 0.59
Identities = 32/134 (23%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Frame = +1
Query: 412 PGARPXXLPRSXGTSPXLLVAPPXSAXXX---PPXXXXXTPPTLPXXXXLRXRPXPQSXA 582
P A+P +P A P SA P PT Q+
Sbjct: 425 PWAKPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAP 484
Query: 583 SXPSXAXPXXXXXXXXPXXPXPPXPPLSXSPXXX---PPRXLAXXV--PXXPPPXXXXPX 747
P + P P P PP P P PP P P P P
Sbjct: 485 FIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPA 544
Query: 748 XPAXPGPPXXLRXP 789
PA PG P P
Sbjct: 545 VPAMPGIPGATAPP 558
Score = 27.5 bits (58), Expect = 2.4
Identities = 21/90 (23%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +3
Query: 423 PPSPPPXXGXVAXAPRRPPG-IXXXXPXXVXXPXPPHPPXXXXPXXTPXPPIPGXXXFXX 599
P S PP + +P + + P PP P P PPIPG
Sbjct: 457 PSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPG------ 510
Query: 600 XPLPXXPSXRXXRPXPSPXAAQXXPXXXSP 689
P P+ +P P P +P
Sbjct: 511 --APGMPNLNMSQPPMVPPGMALPPGMPAP 538
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.79
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 516 PXPPHPPXXXXPXXTPXPPIPG 581
P PP PP P P PP PG
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 516 PXPPHPPXXXXPXXTPXPPIP 578
P PP PP P P PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +2
Query: 464 SSSPPRXXPXPPXXXXXPXPPPPSXXXXPXXNAXXPNPXXPXLPXXSPXXXPXXPXL 634
S PP P P PPP P+P P P P P P L
Sbjct: 136 SHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKL 192
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 1.8
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 6/112 (5%)
Frame = +3
Query: 375 PXXPXXXPRPXXXX--RAPPSPP-PXXGXVAXAPRRP-PGIXXXXPXXVXXPXPPHPPXX 542
P P RP AP P P V A P P + P P PP P
Sbjct: 539 PEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVV 598
Query: 543 XXPXXTPXPPI-PGXXXFXXXP-LPXXPSXRXXRPXPSPXAAQXXPXXXSPP 692
P PP+ P P P P P P AA P S P
Sbjct: 599 PEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVP 650
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 448 PKXGGGXGGARXXXXGRGXXXGXXG 374
P+ GGG G R GRG G G
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGG 467
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = -3
Query: 672 GXTERRXGRXGXXRXGXXGXXXGXXXGRXGXXGLGXXAXXXGXXXXEGGGGXGXXXXXGG 493
G + + R G G G G G G G G GGG G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
Query: 492 XGXXRGG 472
G RGG
Sbjct: 183 RGGSRGG 189
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -1
Query: 800 GXXXGXRSXXGGP-GXAGXXGXXXXGGGXXGTXXAXXRGGXXXGXXLSGGXGG 645
G G R GG G G GGG G RGG G G GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFR-GGSRGG 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,738,847
Number of Sequences: 5004
Number of extensions: 23821
Number of successful extensions: 282
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -