Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_H19
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1377 + 36764461-36765339 34 0.13
07_03_0600 + 19866757-19867218,19867920-19868429 32 0.39
04_03_0884 + 20543084-20543638 32 0.52
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 31 0.69
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 31 1.2
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 31 1.2
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 30 1.6
09_04_0379 - 17094540-17094868,17095354-17095717 30 2.1
07_03_1028 - 23378140-23378802 29 3.7
06_03_1373 + 29667871-29668782,29668872-29669851,29670156-296703... 29 3.7
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.7
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 29 4.8
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 29 4.8
07_03_0347 + 17036086-17036206,17036548-17037173 28 6.4
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 28 6.4
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 28 6.4
01_06_0353 - 28647452-28647477,28647568-28649134 28 6.4
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793... 28 8.5
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 28 8.5
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 28 8.5
02_05_1081 + 33971950-33972606 28 8.5
>01_06_1377 + 36764461-36765339
Length = 292
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 140 PEGEASAVAAHPVRENRADRLDGTEAGR-RVRQAARPRLQHGP-PRLEPPRSNYSFAGAP 313
P+ ASA+ P+ R G G+ R+R A R R P P+ PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 314 FPPRTKVASPPVIGSER 364
PP PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = +2
Query: 92 EKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRL-QHGPP 268
++ P T G H P + S A P + + + +Q P Q GPP
Sbjct: 2 QQPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
Query: 269 RLEPPRSNYSFAGAPFPPRTKVASPP 346
PP+ + G P PP + A PP
Sbjct: 60 HAPPPQQPPAMWGQPPPPPPQYAPPP 85
>04_03_0884 + 20543084-20543638
Length = 184
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 260 GPPRLEPPRSNYSFAGAPFPPRTKVA 337
GP + PPRS ++ A AP PP+ K+A
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMA 35
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 242 RPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGS 358
R RL+ G RL P R + S A P PP A+PP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +2
Query: 83 GYFEKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQA--ARPRLQ 256
G + P + M + + A AV HP + RA G + + R R++
Sbjct: 399 GCVKDYPMQLRMQALEMIETVVAAVAVFPHPPSQ-RAAAAAGASRVPAIASSPRGRRRIE 457
Query: 257 HGPPRLEPPR--SNYSFAGAPFPPRTKVASPPV 349
R+EPPR S+ F +P PP SPP+
Sbjct: 458 GSGRRIEPPRPPSHRGFRPSPPPPGVAYNSPPL 490
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 215 AGRRVRQAARPRLQHGPP-RLEPPRSNYSFAGAP 313
AG+ R RP+ QH PP R PPR ++ + P
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKP 116
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/102 (27%), Positives = 42/102 (41%)
Frame = +2
Query: 65 RRRFPSGYFEKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAAR 244
RRR P E+ PA + + + + +S PVR N + R + R Q R
Sbjct: 238 RRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDR 297
Query: 245 PRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSERLR 370
+ Q P+ RS +P P R + + P S+RLR
Sbjct: 298 VKEQVRSPKQAQSRSR-----SPSPARKRESRSPSPRSKRLR 334
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 126 NICVSRKVRHPRSRPTQSARTGRTASTVRRPADG 227
N + R++RH +PT AR G + +PA G
Sbjct: 176 NRAIPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>07_03_1028 - 23378140-23378802
Length = 220
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 71 RFPSGYFEKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPR 250
R P+ + + + + + E A A P REN+ DR DG R R+A
Sbjct: 94 RMPNNRTTRPTTRRASSSRSRTKEESHARGGGAAPRRENK-DRKDGAGGRRSQRRAPTIS 152
Query: 251 LQHGPPRLEPP 283
PP PP
Sbjct: 153 GPRVPPPATPP 163
>06_03_1373 +
29667871-29668782,29668872-29669851,29670156-29670350,
29670460-29670676
Length = 767
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 68 RRFPSGYFEKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARP 247
RR G E+ A+ HL+ P GE+ AA V E D E+ RQ
Sbjct: 32 RRVRVGEDEEEAAREESQELHLQMPLGESRPRAAAAVEEKSLDGGVEEESNAGQRQREEE 91
Query: 248 RLQHG 262
++ HG
Sbjct: 92 QIDHG 96
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +2
Query: 71 RFPSGYFEKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPR 250
R P+G K +M Q +R E + +A EN+ + + A V A +
Sbjct: 212 RKPAGVGSMSMNKVSMQSQAMRMSSHEITTIAGAGRVENKVSTIAPSAAAAAVASAGGGQ 271
Query: 251 LQHGPPRLEPPRSNYSFAGAPFPP 322
+ PP PP A P PP
Sbjct: 272 VPAAPP---PPAGPPPPAPPPLPP 292
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 128 HLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQ 256
HLR P G A A A ++ R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQSC--RVDGGELGRLVSSPQCPRLE 146
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 224 RVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVI 352
R A P PPR P GAP PPR A P++
Sbjct: 16 RTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLV 58
>07_03_0347 + 17036086-17036206,17036548-17037173
Length = 248
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 269 RLEP-PRSNYSFAGAPFPPRTKVAS 340
RLEP PR+ FA AP P R VA+
Sbjct: 61 RLEPTPRAKLDFAAAPSPARAAVAA 85
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 211 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTA 65
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 233 QAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSERLR 370
+ +P+L+ P+ EPP+ P PP+T P + ER R
Sbjct: 174 EETKPKLEEKSPKAEPPKM-------PLPPKTSPTEPQLPPKERER 212
>01_06_0353 - 28647452-28647477,28647568-28649134
Length = 530
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +2
Query: 122 GQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSF 301
G HLR+P + A P R A D R R+ A ++ RL P +++S
Sbjct: 27 GPHLRRP------LRAAPHRARCAS--DAATTATRHRRPAEENIREEAARLRGPGNDFSA 78
Query: 302 AGAPFPP 322
PFPP
Sbjct: 79 WYVPFPP 85
>11_06_0542 +
24777453-24777632,24777654-24778478,24778576-24779319,
24779422-24780354,24780456-24780938,24780969-24781082,
24781240-24781636,24781732-24782024,24782392-24782802
Length = 1459
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 221 RRVRQAARPRLQHGPPRLEPPRSNYSFAGAP 313
++V+Q L H PP PPR++ SF G P
Sbjct: 605 QKVKQQVLQGLHHRPPP-HPPRADRSFKGEP 634
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 155 SAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAG 307
+A AA P R A+ T+ R R +ARP PPR P ++ S AG
Sbjct: 9 AAAAAFPFRLFSAEARRNTKGSRSKRGSARPLKPSPPPR---PSASSSAAG 56
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +2
Query: 116 MAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNY 295
+AG H GEA+A AA + D DG EA +R RP+L+ PP
Sbjct: 156 LAGAH-DDVGGEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGR 209
Query: 296 SFAGAPFPPRTKVASPPVIGSER 364
S + P + + SP + G +R
Sbjct: 210 SRGRSRHPRKAESTSPSISGGDR 232
>02_05_1081 + 33971950-33972606
Length = 218
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 266 PRLEPPRSNYSFAGAPFPPRTKVASPPVIGS 358
P +P R +S A +P P V+SPPV+ S
Sbjct: 26 PASKPRRRRHSKAASPPPKVAAVSSPPVVKS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,458,763
Number of Sequences: 37544
Number of extensions: 217817
Number of successful extensions: 1204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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