Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_H15
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 34 0.59
L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 34 0.59
CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 34 0.59
BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 34 0.59
BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 34 0.59
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 33 0.78
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 33 0.78
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 33 0.78
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 33 0.78
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 33 0.78
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein. 31 4.1
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni... 31 4.1
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte... 31 4.1
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto... 31 4.1
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 31 5.5
DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived fa... 30 9.6
AK091703-1|BAC03727.1| 571|Homo sapiens protein ( Homo sapiens ... 30 9.6
AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein. 30 9.6
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 33.9 bits (74), Expect = 0.59
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = -2
Query: 401 RSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 222
RSR + + S+ + S+S + +S S + S SSS+ S +T GS+S
Sbjct: 428 RSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSS-- 485
Query: 221 THRHSPLSFSPDLLSGSRFRSGGR 150
R S S S S SR RS GR
Sbjct: 486 --RDSSSSTSTSSSSESRSRSRGR 507
>L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha
protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.59
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 662 NKVTXXQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 555
+K + + + TP + KRSV +RSPHQL PS +S
Sbjct: 117 SKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.59
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 662 NKVTXXQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 555
+K + + + TP + KRSV +RSPHQL PS +S
Sbjct: 117 SKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.59
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 662 NKVTXXQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 555
+K + + + TP + KRSV +RSPHQL PS +S
Sbjct: 117 SKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.59
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 662 NKVTXXQNLYTPRHDVCKRSVRSRSPHQLEIPSGYS 555
+K + + + TP + KRSV +RSPHQL PS +S
Sbjct: 117 SKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162
Query: 74 V 72
V
Sbjct: 163 V 163
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162
Query: 74 V 72
V
Sbjct: 163 V 163
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162
Query: 74 V 72
V
Sbjct: 163 V 163
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162
Query: 74 V 72
V
Sbjct: 163 V 163
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 24 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 81
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 82 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 139
Query: 74 V 72
V
Sbjct: 140 V 140
>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
Length = 1566
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
protein.
Length = 1581
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP205
protein.
Length = 1566
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP220
protein.
Length = 1581
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 30.7 bits (66), Expect = 5.5
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 246
G T E S + R + TR S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRGSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 245 TKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR---FCEAXXXXXXXXXXXXLSPASSPTK 75
GS+S T R S S S S SR R R ++ SP+ PTK
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162
Query: 74 V 72
V
Sbjct: 163 V 163
>DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived
factor 1 delta protein.
Length = 140
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -3
Query: 598 AHAARTNLKSLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAAR 419
+H AR N+K L+++ + C + + A N + D +L +YL+ A L + AA
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKA-LNNLISAAP 95
Query: 418 HENPLIVAAGNYIPDP 371
+I A P P
Sbjct: 96 AGKRVIAGARALHPSP 111
>AK091703-1|BAC03727.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ34384 fis, clone HCHON1000131, weakly similar to
KES1 PROTEIN. ).
Length = 571
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 380 TRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPL 201
T PS N P+T P+ + S + A H+ S SS + + GS S LTH S
Sbjct: 106 TSPSHVNLSPNTVPEFSYSSSEDELYDADEFHQ--SGSSPKRLIDSSGSASVLTHSSSGN 163
Query: 200 SFS-PD 186
S PD
Sbjct: 164 SLKRPD 169
>AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.
Length = 1505
Score = 29.9 bits (64), Expect = 9.6
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = -2
Query: 374 PSRPNGKPSTSPKARHYGSS*SINGAFRH-HKHRSPSSSNPSLATKGSTSELTHRHSPLS 198
P RP P P G + F H +HR SS+ S +G E H P+S
Sbjct: 11 PHRPPRAPP--PPLPLLGCPPGLTSLFSHLSRHRGKSSAGQS--RQGGRPEPGHGSLPVS 66
Query: 197 FSPDLLSGSRFRSGGRFCEA 138
PD+ R + G + EA
Sbjct: 67 SRPDMREKGRRKKGRTWAEA 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,919,044
Number of Sequences: 237096
Number of extensions: 2055752
Number of successful extensions: 8585
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8564
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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