Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_H09
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.038
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 27 0.53
U67954-4|AAM54180.1| 345|Caenorhabditis elegans Wrapper/rega-1/... 30 1.4
AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobuli... 30 1.4
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 1.9
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 1.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 2.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 2.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 2.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 2.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 2.5
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 3.3
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 29 3.3
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 29 3.3
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 4.4
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 4.4
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 29 4.4
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 5.8
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 28 5.8
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 5.8
Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical pr... 28 7.7
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 28 7.7
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 7.7
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 7.7
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 459 PTANTCQARTSTHFTGKTCIRLRNPNTAASPDTNAPDVLSYR--SRRLQMCQFFFPTETC 632
P+ ++CQ+ S+ T TCIR N+ ++ + + R S+ LQ+C T TC
Sbjct: 90 PSCSSCQSACSSACTTPTCIRTCQRNSCSNLCNTGSNSCTNRCNSQCLQICTTPSCTNTC 149
Query: 633 LLSCLLAC 656
SC AC
Sbjct: 150 SNSCSNAC 157
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 26.6 bits (56), Expect(2) = 0.53
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 462 TANTCQARTSTHFTGKTCIRLRNPNTAASPDT 557
T C +T T TC+ L NP T S T
Sbjct: 83 TCGYCTGTATTTRTSTTCVDLTNPTTGVSDCT 114
Score = 23.8 bits (49), Expect(2) = 0.53
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 300 QPRKSHLRLPVQTHKTFYHYANFLPQQILPATTQTTI 410
Q S L + V +TF L QQ+L TT+T++
Sbjct: 6 QEPHSLLEVVVALMETFSQSPQHLQQQLLSTTTRTSV 42
>U67954-4|AAM54180.1| 345|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform c
protein.
Length = 345
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 450 VWE*HRVREVEPVKL*FAWWLVRFVAVRSLHSGKMSCESAQVAGGETSAVAAHPVRENRA 271
VW + E +K + V+ H+GK +C + +AG + + + H +
Sbjct: 151 VWTKQAAKLPEDIKREHGGARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQG 210
Query: 270 DRLDGNGGRPTGPP 229
+R GRP GPP
Sbjct: 211 ER----EGRP-GPP 219
>AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1C protein.
Length = 344
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 450 VWE*HRVREVEPVKL*FAWWLVRFVAVRSLHSGKMSCESAQVAGGETSAVAAHPVRENRA 271
VW + E +K + V+ H+GK +C + +AG + + + H +
Sbjct: 150 VWTKQAAKLPEDIKREHGGARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQG 209
Query: 270 DRLDGNGGRPTGPP 229
+R GRP GPP
Sbjct: 210 ER----EGRP-GPP 218
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRNPTANTCQARTSTHFT 503
P TT TT P + V+PT T ARTST T
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTT 516
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRNPTANTCQARTSTHFT 503
P TT TT P + V+PT T ARTST T
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTT 516
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = -2
Query: 471 CSRLGSSVWE*HRVRE--VEPVKL*FAWWLVRFVAVRSLHSGKMSCESAQVAGGETSAVA 298
C +W R + +EP++ A AV G +CE+ + G A A
Sbjct: 56 CRGSAKDIWSEVRTLKTALEPIQNRTARQAYADAAVHGGGGGGGNCEACCLPGPAGPAGA 115
Query: 297 -AHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
+P R + A L GN G+P P + ITPP
Sbjct: 116 PGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPP 148
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 369 RSLHSGKMSCESAQVAGGE----TSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPP 208
R G CE + G + T A P + A L+GN GRP P + +TPP
Sbjct: 79 RQAGEGNGQCEGCCLPGAQGPPGTPGSAGRPGKPG-APGLNGNPGRPPKEPCEPLTPP 135
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SCES + G A P R + A L GN GRP P + ITPP
Sbjct: 95 SCESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -2
Query: 354 GKMSCESAQVAGGE----TSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPP 208
G CE + G + T A P + A L+GN GRP P + ITPP
Sbjct: 82 GNGQCEGCCLPGAQGPPGTPGRAGRPGKPG-APGLNGNPGRPPKEPCEPITPP 133
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 264 LDGNGGRPTGPPNDEIT-PPARTADIGAP 181
L GN GRP P D IT PP R G P
Sbjct: 114 LPGNPGRPPAQPCDPITPPPCRPCPQGPP 142
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 386 TSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLHPP 523
TSH ++ + +R T P+ ++ SS H L + N H P
Sbjct: 243 TSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSP 288
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 386 TSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLHPP 523
TSH ++ + +R T P+ ++ SS H L + N H P
Sbjct: 243 TSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSP 288
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 184 GSNIGSSCWRRDLVVWRTRRPASVTVEAICPVLADWVGRNRGSLTSGY 327
G N +C RR+ + + +P+ V + + W GR ++S Y
Sbjct: 346 GDNTAETCSRRERLSYEIMKPSEVLIFDFGSEIYVWTGRYSNKVSSAY 393
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 498 FTGKTCIRLRNPNTAASPDTNAPDVLSYRSR----RLQMCQFFFPTETCLLSCLLAC 656
FT KT RL + T DV+ + RL+ Q + PTETC+ S C
Sbjct: 7271 FTDKTMSRLESIETLTIGGETVSDVVIETAMKKFPRLRTIQIYGPTETCIWSLTNKC 7327
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Frame = -2
Query: 354 GKMSCESAQVAG-GETSAVAAHPVRENR--ADRLDGNGGRPTGPPNDEIT-PPARTADIG 187
G SC + G S P R R A L GN GRP P IT PP R G
Sbjct: 102 GGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQG 161
Query: 186 AP 181
P
Sbjct: 162 PP 163
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 329 CADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEE 457
C +D LC LLT L+ H N+ S++ C++ +
Sbjct: 142 CPTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQ 184
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 329 CADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEE 457
C +D LC LLT L+ H N+ S++ C++ +
Sbjct: 142 CPTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQ 184
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 302 TAEVSPPATCADSQDILPLCKLL 370
T V PPA C D D PL KL+
Sbjct: 84 TCNVCPPAICVDQWDNCPLYKLI 106
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENR--ADRLDGNGGRPTGPPNDEITPP 208
SC + G A P R R A L GN GRP P + ITPP
Sbjct: 100 SCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPP 148
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 273 ADRLDGNGGRPTGPPNDEITPP 208
A L GN GRP P D ITPP
Sbjct: 122 APGLPGNPGRPPQQPCDPITPP 143
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 273 ADRLDGNGGRPTGPPNDEITPP 208
A L GN GRP P D ITPP
Sbjct: 122 APGLPGNPGRPPQQPCDPITPP 143
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 344 DILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLH 517
D LP N +SHH+N+N+ +T S T P+ + +T ++ +R++L+
Sbjct: 63 DQLPTSSHHPPLNSSSHHSNHNYPDTT-----LSSTSAPSTSNYLTTSTYSDNRRSLY 115
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 112 LVGPATAQSPTRRRTLAQVQPERGGSNIGSSCWRRDLVVWRTRRP 246
+V P+ + SP TLAQ + G N SSCW +V R P
Sbjct: 12 IVSPSVSMSP-ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVP 55
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 112 LVGPATAQSPTRRRTLAQVQPERGGSNIGSSCWRRDLVVWRTRRP 246
+V P+ + SP TLAQ + G N SSCW +V R P
Sbjct: 59 IVSPSVSMSP-ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVP 102
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -2
Query: 345 SCESAQVAGGETSA-VAAHPVRENRADR--LDGNGGRPTGPPNDEITPP 208
+CE+ + G A P R +A L GN GRP P + ITPP
Sbjct: 100 NCEACCLPGAAGPAGTPGKPGRPGKAGAPGLPGNPGRPPQQPCEPITPP 148
>Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical
protein ZK632.11 protein.
Length = 453
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 82 TEALKHTLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSSCWRRDL 222
+E +K T T ++ T +R L E+ G +IGSS WR+ L
Sbjct: 39 SETMKGTETEFEKFVIDRTITPQRKLNAEDVEKSGEDIGSSEWRKRL 85
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
C25F6.3 protein.
Length = 1059
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEPNR-EHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 565
+H + T T CYS P E + T ++ + P EP ++ + ++
Sbjct: 988 THQPHVTEDDCTGCTLCYSVCPIPECIEMVPRTGPWKAPKRGVKPSVEPGTPKVVKVDQR 1047
Query: 566 GRLILQVT 589
GR+IL T
Sbjct: 1048 GRVILDTT 1055
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 372 PQQILPATTQTTILRV-PPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAAS 548
P + PA + T+ PP+ + P+L PT Q S + + + ++N AA+
Sbjct: 250 PAPVAPAPSIETLTSTSPPVTQQLAPSLSEPTFQVIQTEESKNMSMDS---VKNVVDAAA 306
Query: 549 PDTNAPDVLSYRSR 590
AP LS R
Sbjct: 307 LSAPAPAPLSQSDR 320
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 264 LDGNGGRPTGPPNDEITPP 208
L GN GRP P D ITPP
Sbjct: 123 LPGNPGRPPQAPCDPITPP 141
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 273 ADRLDGNGGRPTGPPNDEITPP 208
A+ L+GN GRP P + +TPP
Sbjct: 194 ANGLNGNPGRPPEAPCEPVTPP 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,377,801
Number of Sequences: 27780
Number of extensions: 417379
Number of successful extensions: 1537
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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