Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_H06
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527...    31   1.1  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   5.9  

>04_03_0747 -
           19251617-19251781,19252377-19252502,19252606-19252716,
           19252931-19253679,19254034-19254167,19254595-19254740,
           19255166-19255336,19255977-19256828
          Length = 817

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 21/81 (25%), Positives = 25/81 (30%)
 Frame = +3

Query: 567 PXXPXPPPXATPXPGXXXXSXPGXXXPXXKXFXXSXPXXPPXLXXXXXFSPXAXXXXASX 746
           P  P PPP  TP P       P    P    +    P   P         P A     + 
Sbjct: 128 PPPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTP--TPTPSAPPRAAAPSPAG 185

Query: 747 XXXPGXXXXSSSPXSXIRAPL 809
              P     SS+P S +  PL
Sbjct: 186 TPSPSPIPPSSTPVSALSGPL 206


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = +3

Query: 561 SXPXXPXPPPXATPXPGXXXXSXPGXXXPXXKXFXXSXPXXPP 689
           S P  P PPP A P P       P    P    F  S P  PP
Sbjct: 285 SPPSPPPPPPPAFPFPFPQLPPLP--HFPPLPSFYPSPPPPPP 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,214,203
Number of Sequences: 37544
Number of extensions: 180466
Number of successful extensions: 994
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)