Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_H05
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   155   4e-40
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   155   4e-40
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.4  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  155 bits (376), Expect = 4e-40
 Identities = 86/157 (54%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -1

Query: 574 GKGXGQXEFSGFGXWHQQXXQVXRXDRSVQRFRGVRARYHHLPCFK---FRFLRXCPAAC 404
           GK  G+ EF+G G       ++ + D     +RG       +  ++   F F        
Sbjct: 148 GKAGGEREFTGLGNC---LTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 204

Query: 403 CRTLRTHPL*SGGPIAQTVTTVAGIISYPFDTVRRRMMMQSXRAKSDILYKNTIHCWATI 224
               +T  L S G IAQ VTTVAGI+SYPFDTVRRRMMMQS RAKS+ILYK+T+HCWATI
Sbjct: 205 PDPKKTPFLISWG-IAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATI 263

Query: 223 AKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 113
            KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 264 YKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score =  111 bits (267), Expect = 7e-27
 Identities = 61/116 (52%), Positives = 67/116 (57%)
 Frame = -2

Query: 762 PTQGLNXAFKDKYKQGFFGGVDKXXXFWXXXXGNWASXXXXXXXXXXXXXPLDFERTLFX 583
           PTQ LN AFKDKYKQ F GGVDK   F     GN AS             PLDF RT   
Sbjct: 85  PTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLA 144

Query: 582 PDLVRXMAXGNFPVLEXGISXXFKSDGXIGLYRGFGVSVQGIIIYRASNFGFYDXA 415
            D+ +      F  L   ++  FK+DG  GLYRGFGVSVQGIIIYRA+ FGFYD A
Sbjct: 145 ADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTA 200



 Score = 31.5 bits (68), Expect = 0.009
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 319 PFDTVRRRMMMQ--SXRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 167
           P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++G  +NV+R
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  155 bits (376), Expect = 4e-40
 Identities = 86/157 (54%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -1

Query: 574 GKGXGQXEFSGFGXWHQQXXQVXRXDRSVQRFRGVRARYHHLPCFK---FRFLRXCPAAC 404
           GK  G+ EF+G G       ++ + D     +RG       +  ++   F F        
Sbjct: 148 GKAGGEREFTGLGNC---LTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 204

Query: 403 CRTLRTHPL*SGGPIAQTVTTVAGIISYPFDTVRRRMMMQSXRAKSDILYKNTIHCWATI 224
               +T  L S G IAQ VTTVAGI+SYPFDTVRRRMMMQS RAKS+ILYK+T+HCWATI
Sbjct: 205 PDPKKTPFLISWG-IAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATI 263

Query: 223 AKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 113
            KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 264 YKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score =  111 bits (267), Expect = 7e-27
 Identities = 61/116 (52%), Positives = 67/116 (57%)
 Frame = -2

Query: 762 PTQGLNXAFKDKYKQGFFGGVDKXXXFWXXXXGNWASXXXXXXXXXXXXXPLDFERTLFX 583
           PTQ LN AFKDKYKQ F GGVDK   F     GN AS             PLDF RT   
Sbjct: 85  PTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLA 144

Query: 582 PDLVRXMAXGNFPVLEXGISXXFKSDGXIGLYRGFGVSVQGIIIYRASNFGFYDXA 415
            D+ +      F  L   ++  FK+DG  GLYRGFGVSVQGIIIYRA+ FGFYD A
Sbjct: 145 ADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTA 200



 Score = 31.5 bits (68), Expect = 0.009
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 319 PFDTVRRRMMMQ--SXRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 167
           P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++G  +NV+R
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 123 LISSYKTSTKAPPVPLRTLEKAPL 194
           L++++KT T+ P    + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 313 DTVRRRMMMQSXRAKSDILYKNTI 242
           DT+ R+ ++   + K D LY N +
Sbjct: 289 DTLIRKYIIPKEQVKEDSLYTNIV 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,184
Number of Sequences: 438
Number of extensions: 3423
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)