Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G23
(845 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0486 - 3455030-3455770 32 0.50
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 31 0.87
12_02_0299 - 17051570-17052474,17053542-17053755 29 3.5
12_01_0506 + 4017568-4017716,4018171-4018474 29 3.5
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 29 4.7
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 29 4.7
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 29 4.7
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 29 4.7
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 29 4.7
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 4.7
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 29 4.7
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 29 4.7
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 29 4.7
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 29 4.7
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 29 4.7
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 29 4.7
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 29 4.7
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 29 4.7
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 29 4.7
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 4.7
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 4.7
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 29 4.7
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 29 4.7
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 29 4.7
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 29 4.7
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.2
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 28 8.1
>06_01_0486 - 3455030-3455770
Length = 246
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +3
Query: 597 PXXPXXXXXXYPXXPXPXRTFXXXPXXSXLPRPSSPXAXXPXVSXXRXPAXAXFSPXPXX 776
P P P P P T P P P P V P + P P
Sbjct: 70 PRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTP 129
Query: 777 XXAXRFSPPXXXPSPP 824
+ PP PSPP
Sbjct: 130 PSPPPYVPPPTPPSPP 145
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 639 PXPXRTFXXXPXXSXLPRPSSPXAXXPXVSXXRXPAXAXFSPXPXXXXAXRFSPPXXXPS 818
P P RT P +P PS+P P R A A +P P P P
Sbjct: 165 PPPPRTRQVNPAPPPVPSPSAP-PLPPQPPPPRNQAQADKAPIPVAPPGAAVPPAQPQPQ 223
Query: 819 PP 824
PP
Sbjct: 224 PP 225
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +3
Query: 627 YPXXPXPXRTFXXXPXXSXLPRPSSPXAXXPXVSXXRXPAXAXFSPXPXXXXAXRFSPPX 806
+P P P F P P P P + P F P P + PP
Sbjct: 267 WPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326
Query: 807 XXPSPP 824
P PP
Sbjct: 327 PPPPPP 332
>12_01_0506 + 4017568-4017716,4018171-4018474
Length = 150
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -3
Query: 300 GGXXVTXXXAFGLGXPG--GRXXXPWTGWXGXRRPG 199
G +T GLG G G PW GW G RR G
Sbjct: 3 GPVLITMEARRGLGVAGHLGGVGAPWGGWRGYRRQG 38
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 562 PPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPSSVQTSPPTPQSALVEQVHIPDGTISEP 621
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 622 KSNTLEPRRIIP 633
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 506 PPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 565
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 566 KSNTLEPRRIIP 577
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 441 PPSPSQQPPLLAPQPVQASPTSPAKQHAPPAPSSVQTSPPTPQSALVEQVHIPNGTTSEP 500
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 501 KSNTLEPRRIIP 512
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 511 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 570
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 571 KSNTLEPRRIIP 582
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 515 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 574
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 575 KSNTLEPRRIIP 586
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 552 PPSPSQQPPLPAPQPVQASPTSPAKKHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 611
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 612 KSNTLEPRRIIP 623
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 576 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 635
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 636 KSNTLEPRRIIP 647
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 576 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 635
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 636 KSNTLEPRRIIP 647
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPPVQTSPPTPQSALVEEVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPNGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 511 PPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 570
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 571 KSNTLELSRIIP 582
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 511 PPSPSQQPPLPVPQPVQASPTSPAKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 570
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 571 KSNTLELSRIIP 582
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 566 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGTTSEP 625
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 626 KSNTLEPRRIIP 637
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 598 PPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEEVHIPDGTTSEP 657
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 658 KSNTLEPRRIIP 669
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 248 PPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPP 361
PP P+P+A + PP P AA PG PP
Sbjct: 334 PPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPP 371
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +2
Query: 191 PXXPGRRKPIX---PVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXP-GKXXLP 358
P P ++ P+ PVQ P P A V PPTP+ A V P G P
Sbjct: 442 PPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPPSVQTSPPTPQSALVEQVHIPDGITSEP 501
Query: 359 PXXXWEXXRVPP 394
E R+ P
Sbjct: 502 KSNTLELSRIIP 513
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,547,177
Number of Sequences: 37544
Number of extensions: 230334
Number of successful extensions: 496
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -