Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G23
(845 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 6.9
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 6.9
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 6.9
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 6.9
AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associate... 31 6.9
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 6.9
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 6.9
Identities = 39/173 (22%), Positives = 46/173 (26%), Gaps = 4/173 (2%)
Frame = +2
Query: 191 PXXPGRRKPIXPVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPPXXX 370
P PG P+ P PP P P A + PP P PG +PP
Sbjct: 1100 PPLPGAGIPLPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPG-AGIPPPPP 1156
Query: 371 WEXXRVPPXXFXXXKXXGFXPKXXXXXSXPXKTLRXPGGGXXPXLPRLXXX*XNPLPXRX 550
+PP P P L G P LP PLP
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1216
Query: 551 XXPFSXXXXXXPHXXSPXPXXXXXXXPXXSXPXXDLPXXP----XXLPPXXPV 697
P P P P P +P P +PP P+
Sbjct: 1217 IPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1267
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 6.9
Identities = 39/173 (22%), Positives = 46/173 (26%), Gaps = 4/173 (2%)
Frame = +2
Query: 191 PXXPGRRKPIXPVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPPXXX 370
P PG P+ P PP P P A + PP P PG +PP
Sbjct: 1100 PPLPGAGIPLPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPG-AGIPPPPP 1156
Query: 371 WEXXRVPPXXFXXXKXXGFXPKXXXXXSXPXKTLRXPGGGXXPXLPRLXXX*XNPLPXRX 550
+PP P P L G P LP PLP
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1216
Query: 551 XXPFSXXXXXXPHXXSPXPXXXXXXXPXXSXPXXDLPXXP----XXLPPXXPV 697
P P P P P +P P +PP P+
Sbjct: 1217 IPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1267
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 6.9
Identities = 39/173 (22%), Positives = 46/173 (26%), Gaps = 4/173 (2%)
Frame = +2
Query: 191 PXXPGRRKPIXPVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPPXXX 370
P PG P+ P PP P P A + PP P PG +PP
Sbjct: 1100 PPLPGAGIPLPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPG-AGIPPPPP 1156
Query: 371 WEXXRVPPXXFXXXKXXGFXPKXXXXXSXPXKTLRXPGGGXXPXLPRLXXX*XNPLPXRX 550
+PP P P L G P LP PLP
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1216
Query: 551 XXPFSXXXXXXPHXXSPXPXXXXXXXPXXSXPXXDLPXXP----XXLPPXXPV 697
P P P P P +P P +PP P+
Sbjct: 1217 IPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1267
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 6.9
Identities = 39/173 (22%), Positives = 46/173 (26%), Gaps = 4/173 (2%)
Frame = +2
Query: 191 PXXPGRRKPIXPVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPPXXX 370
P PG P+ P PP P P A + PP P PG +PP
Sbjct: 1100 PPLPGAGIPLPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPG-AGIPPPPP 1156
Query: 371 WEXXRVPPXXFXXXKXXGFXPKXXXXXSXPXKTLRXPGGGXXPXLPRLXXX*XNPLPXRX 550
+PP P P L G P LP PLP
Sbjct: 1157 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1216
Query: 551 XXPFSXXXXXXPHXXSPXPXXXXXXXPXXSXPXXDLPXXP----XXLPPXXPV 697
P P P P P +P P +PP P+
Sbjct: 1217 IPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1267
>AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associated
protein protein.
Length = 368
Score = 30.7 bits (66), Expect = 6.9
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -2
Query: 277 PGVWVGXPRGAAXXALDWXDXLXPPWXPGXGGFVLXXAX*PASYPILLQSKGSILQPRPR 98
PGV R A A DW PP P GG + A IL S+ ++L P PR
Sbjct: 150 PGVEPRPARLAKRVAHDWLRPWPPPPRPQEGGAWVWAARRVLPPGILRASRTAVLSPGPR 209
Query: 97 M 95
+
Sbjct: 210 L 210
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 30.7 bits (66), Expect = 6.9
Identities = 39/173 (22%), Positives = 46/173 (26%), Gaps = 4/173 (2%)
Frame = +2
Query: 191 PXXPGRRKPIXPVQGXXXRPPGXPNPNAXXXVTXXPPTPKRAAXFXVXXPGKXXLPPXXX 370
P PG P+ P PP P P A + PP P PG +PP
Sbjct: 567 PPLPGAGIPLPPPLPGAGIPPPPPLPGA--GIPPPPPLPGAGIPPPPPLPG-AGIPPPPP 623
Query: 371 WEXXRVPPXXFXXXKXXGFXPKXXXXXSXPXKTLRXPGGGXXPXLPRLXXX*XNPLPXRX 550
+PP P P L G P LP PLP
Sbjct: 624 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 683
Query: 551 XXPFSXXXXXXPHXXSPXPXXXXXXXPXXSXPXXDLPXXP----XXLPPXXPV 697
P P P P P +P P +PP P+
Sbjct: 684 IPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 734
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,770,637
Number of Sequences: 237096
Number of extensions: 1368548
Number of successful extensions: 2214
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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