Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G21
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 142 2e-34
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 142 2e-34
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 30 1.6
12_02_0805 - 23329048-23329322,23330049-23330301,23330793-233310... 29 3.8
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 6.6
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 142 bits (345), Expect = 2e-34
Identities = 66/99 (66%), Positives = 78/99 (78%)
Frame = -2
Query: 575 PRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 396
PRKTH+ LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 395 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 279
+ A TE+D +EK ITPMGGFPHYG V D++MI+G G
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 140
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -1
Query: 660 QDEMXDCIGVTQGKGYKGVTSRWHTKKLP 574
+DEM D IGVT+GKGY+GV +RW +LP
Sbjct: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 142 bits (345), Expect = 2e-34
Identities = 66/99 (66%), Positives = 78/99 (78%)
Frame = -2
Query: 575 PRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 396
PRKTH+ LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 395 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 279
+ A TE+D +EK ITPMGGFPHYG V D++MI+G G
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -1
Query: 660 QDEMXDCIGVTQGKGYKGVTSRWHTKKLP 574
+DEM D IGVT+GKGY+GV +RW +LP
Sbjct: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 2 FFFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFANTILLEC 124
FFFFFF +VY RH R R R R F ++ C
Sbjct: 102 FFFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASAC 142
>12_02_0805 -
23329048-23329322,23330049-23330301,23330793-23331029,
23332048-23332176,23334205-23334210
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -3
Query: 595 LAHKEATPVRHTRXLGKLPALELGIL----LGCRSL*LVPV 485
+AH AT ++H + L L A LGIL LGC + VP+
Sbjct: 112 IAHMVATYIKHIKTLYNLGARRLGILDVLPLGCLPISRVPI 152
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -2
Query: 518 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 369
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 368 SEKSITPMGGFPHYGEVNN 312
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,080,591
Number of Sequences: 37544
Number of extensions: 462865
Number of successful extensions: 1218
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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