Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G17
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 198 1e-51
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 192 5e-50
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 69 8e-13
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.14
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 31 0.14
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.32
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.32
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.98
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 2.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.0
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.0
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 26 5.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 9.2
SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||M... 25 9.2
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 198 bits (482), Expect = 1e-51
Identities = 87/103 (84%), Positives = 95/103 (92%)
Frame = -2
Query: 440 KPKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 261
K +RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKF
Sbjct: 340 KSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKF 399
Query: 260 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
DLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 400 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
Score = 146 bits (355), Expect = 2e-36
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = -1
Query: 759 IGQIFSSITAXLRFXGAXNVDXTEFQTNLXXXXXVSTXPLXTYAPVISAEKAYHEQLSVA 580
I Q+ SSITA LRF G+ NVD EFQTNL + PL TY+P++SA KA+HE SV
Sbjct: 235 IAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIH-FPLVTYSPIVSAAKAFHESNSVQ 293
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTQ 433
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++
Sbjct: 294 EITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSR 342
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 192 bits (468), Expect = 5e-50
Identities = 85/103 (82%), Positives = 94/103 (91%)
Frame = -2
Query: 440 KPKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 261
K KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKF
Sbjct: 336 KAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKF 395
Query: 260 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
DLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
Score = 149 bits (361), Expect = 4e-37
Identities = 70/109 (64%), Positives = 82/109 (75%)
Frame = -1
Query: 759 IGQIFSSITAXLRFXGAXNVDXTEFQTNLXXXXXVSTXPLXTYAPVISAEKAYHEQLSVA 580
I Q+ SSITA LRF G+ NVD EFQTNL + PL TYAP++SA KA+HE SV
Sbjct: 231 IAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIH-FPLVTYAPIVSAAKAFHESNSVQ 289
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTQ 433
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK +
Sbjct: 290 EITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAK 338
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 68.9 bits (161), Expect = 8e-13
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = -2
Query: 434 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 255
K + FV+W P + PP DL + + + N+T+I E + RL +F
Sbjct: 336 KNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSA 387
Query: 254 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 132
M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 65.3 bits (152), Expect = 9e-12
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = -1
Query: 759 IGQIFSSITAXLRFXGAXNVDXTEFQTNLXXXXXVSTXPLXTYAPVISAEKAYHEQLSVA 580
+ + + +T RF G N D + N+ + + +AP+ + + + +SV
Sbjct: 229 VSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFF-MVGFAPLAAIGSSSFQAVSVP 287
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTQ--AYY 424
E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++T+ AY+
Sbjct: 288 ELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYF 341
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 325 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 152
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 151 TKKSAWTPLKARVREPKSTK 92
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.14
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -3
Query: 445 HQNPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTT 266
+ S+L +S+ P+S + STT+ T ++ TP S+ + T
Sbjct: 276 YNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTA 335
Query: 265 SSTSCTP--SVLSCTGTS 218
+STS TP SV S T TS
Sbjct: 336 TSTSSTPLSSVNSTTATS 353
Score = 29.1 bits (62), Expect = 0.74
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = -3
Query: 445 HQNPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTT 266
+ SVL SS P+S + STT+ + ++ TP S+ A +
Sbjct: 409 YNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSA 468
Query: 265 SSTSCTPSVLSCTGTS 218
SST T SV S T TS
Sbjct: 469 SSTPLT-SVNSTTATS 483
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 31.5 bits (68), Expect = 0.14
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Frame = -3
Query: 454 HRYHQNPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL 278
H+ P V+ N V P +R + P+ ++P P+ CP+ PP L
Sbjct: 177 HQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPAT 235
Query: 277 ALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSAWTPLKARVREP 104
A+ SS S ++ + T + + P + WLP + T + P A V +P
Sbjct: 236 AIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT----FQPPSANVYQP 291
Query: 103 KS 98
S
Sbjct: 292 AS 293
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.32
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 257
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 256 SCTPSVLS 233
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.32
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 257
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 256 SCTPSVLS 233
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.98
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -3
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKL----GLALTT 266
S +ST + P S S ++ P P T P + S P PP S L T
Sbjct: 169 STSCTTSTSIPPTGGSSSLST--PITP--TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Query: 265 SSTSCTPSVLSCTGTS 218
+STSCT S TG S
Sbjct: 225 TSTSCTTSTSIPTGGS 240
Score = 28.7 bits (61), Expect = 0.98
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
Frame = -3
Query: 433 SVLSNSSTGVQPVSRSVST-TSHPPWCPEATWPRFNVP---SACCPTPPPSLKLGLALTT 266
S SS+ + S S +T TS PP T VP ++ TPPP T+
Sbjct: 323 SSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTS 382
Query: 265 SSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSKRITKKSAWTPLKARVREPKSTKPV 86
SS + S SCT TS + +S PV +P + T P ++ PV
Sbjct: 383 SSPLLSTST-SCT-TSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Score = 27.9 bits (59), Expect = 1.7
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Frame = -3
Query: 436 PSVLSNSSTGVQPV---SRSVST-TSHPPWCPEATWPRFNVP---SACCPTPPPSLKLGL 278
P+ S++ T P+ S S +T TS PP T VP ++ TPPP
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTS- 323
Query: 277 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSKRITKKSAWTPLKARVREPKS 98
+ TSS+ + SCT TS + +S PV +P + S P + S
Sbjct: 324 STGTSSSPLPSTSTSCT-TSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTS 382
Query: 97 TKPV 86
+ P+
Sbjct: 383 SSPL 386
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 576 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 451
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 473 PRM*TRPSLPSKPKRTIQFV 414
P++ T P P PKRTIQ V
Sbjct: 93 PKLPTTPQTPKTPKRTIQIV 112
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 448 SDGRVHILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEACVCDLGNGK 591
S G +LGY ++ A++V+A + + HL+ G D K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 391 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 233
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 695 SPSSRLTWSLNPPYPLXHXSRTRQSSLPRRXTMNSFPLPRSQTHASSPPT 546
SPS+ + + PY + + RT S R T+ S P S+ HA + T
Sbjct: 334 SPSAEFSHQ-SSPYLVPNSGRTLNSENARESTIRSVNSPFSEDHADASLT 382
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -3
Query: 424 SNSSTGVQPVSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 296
S S VS S S PP P A P ++PS P PPP
Sbjct: 149 SASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -3
Query: 382 STTSHPPWCPE--ATWPRFNVPSACCPTPPP 296
++TS PP P ++ P VPS P PPP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 689 SSRLTWSLNPPYPLXHXSRTRQSSLPRRXTMNSFPLPRSQTHASSPPTRW*NA 531
S T NP P H RT LP T + + S +H S P W N+
Sbjct: 122 SKSSTLHSNPYCPEHHSIRT----LPSAVTATTSNISTSSSHRSDLPNEWTNS 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,091,101
Number of Sequences: 5004
Number of extensions: 69301
Number of successful extensions: 258
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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