Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G15
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.40
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.70
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 28 1.2
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 28 1.6
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 2.1
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 27 2.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 4.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.9
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 26 4.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.5
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.40
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 385 PATTQTTILRVPPLLHDVTPTLRNP---TANTCQARTSTHFTGKTCIRLRNPNTAASPDT 555
P +T +T + +PP T T NP T+ +C TS TG + L P T P T
Sbjct: 140 PTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSS-SLSTPITPTVPPT 198
Query: 556 N 558
+
Sbjct: 199 S 199
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.70
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 385 PATTQTTILRVPPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAASP-DTNA 561
P T+ T + PP+ P ++ TST T T + P T+++ +T+
Sbjct: 1643 PITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTST 1702
Query: 562 P 564
P
Sbjct: 1703 P 1703
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +3
Query: 303 AEVSPPATCADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE-EPNREHLSS 479
A S T DS+ I +T+ + H + S R SH EP R HLS
Sbjct: 105 ANRSSTNTEKDSRSIAHSTSRSRSTSPANRHRRKEKERTRSNHRHGSHRRHEPYRTHLSR 164
Query: 480 THKHALHRKNLHPPAEPEHRRIARH 554
H+H+ N H + + R H
Sbjct: 165 HHRHS--TTNYHSKRDDRYERRREH 187
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 369 TATNLTSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLHPPAEPEHRRIA 548
T T S ++ + S S + H + +E S H+H HR++ EP ++
Sbjct: 110 TNTEKDSRSIAHSTSRSRSTSPANRHRRK-EKERTRSNHRHGSHRRH-----EPYRTHLS 163
Query: 549 RHER 560
RH R
Sbjct: 164 RHHR 167
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 507 NLHPPAEPEHRRIARHERTG 566
NL PAE +HRR+ R +R G
Sbjct: 235 NLDSPAELKHRRLVRSQRNG 254
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 575 LTGHDDFRMCQFFFPTETCLLSCLL 649
LTGH + MC F P+E ++S L
Sbjct: 133 LTGHSHYVMCAAFHPSEDLIVSASL 157
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 333 DSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNL 512
D LC L + LT ANYN S S++R + E+P+ H H + +
Sbjct: 75 DGHSPTSLCVLENGSVLT---ANYN---SASISRSKAKDEKPHVWHHEGKSLHPERQTSS 128
Query: 513 HPPAEPEHRRI 545
HP H+ +
Sbjct: 129 HPHQVTAHKHL 139
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 4.9
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 306 EVSPPATCADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTH 485
++S P+ +D L +L+T + S T S +SH++ +RE
Sbjct: 683 KISVPSAKMSYKD-LDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKK 741
Query: 486 KHALHRKNLHPPAEPE--HRRIARHERTGRPILQVTTTS 596
K HRK+ E E + AR E T RP L ++S
Sbjct: 742 KDREHRKHRETEEEDEGPPPQPARPEST-RPALAPPSSS 779
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 286 LGGPQPRKSHLRLPVQTHKTFYHYANF 366
+GG Q K +L LP QT FY F
Sbjct: 3065 MGGNQVAKGYLNLPEQTDAKFYFDRRF 3091
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 324 TCADSQDILPLCKLLTATNLTSHHANYNFTG 416
+C + + +C LL+ ++ SH Y++TG
Sbjct: 498 SCVTTDEAFNVCDLLSISDCLSHDFPYSYTG 528
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 6.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 353 TMQTSYRNKSYQPPRKLQFYGFHLSYTMLLPH*GTQPRTLVKHAQART 496
TM + ++K RKL+ HL + L+ H QP +HAQ RT
Sbjct: 1356 TMLKTSQSKDSSSLRKLRATCLHLLFASLVAHKFDQP----QHAQTRT 1399
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 661 APASKQTRKQASFRGEEKLTHSEVVVTCK 575
AP KQ +K ++ + +TH+EVVV K
Sbjct: 465 APIVKQQKKSSALKIVNPVTHTEVVVPQK 493
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,021,564
Number of Sequences: 5004
Number of extensions: 61840
Number of successful extensions: 204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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