Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_G15
         (744 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear prote...    32   2.5  
BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.    32   2.5  
BC127099-1|AAI27100.1|  649|Homo sapiens KIAA1683 protein protein.     30   7.6  
BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.     30   7.6  
AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated prot...    25   8.2  

>BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear protein
           NHN1 protein.
          Length = 953

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +3

Query: 129 AQSPTRRRTLAQVQPERGGSNIGSSCWRRDLVVWRTRRPASVPSR*SARFSRTGWAATAE 308
           A++P RRRTL+      G S  GSS   R L V      +S  S  S+  S       A+
Sbjct: 675 ARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYAD 734

Query: 309 VSPPATCADSQDILP 353
           ++ P + A S+   P
Sbjct: 735 LASPVSSASSRSPAP 749


>BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.
          Length = 718

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +3

Query: 129 AQSPTRRRTLAQVQPERGGSNIGSSCWRRDLVVWRTRRPASVPSR*SARFSRTGWAATAE 308
           A++P RRRTL+      G S  GSS   R L V      +S  S  S+  S       A+
Sbjct: 440 ARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYAD 499

Query: 309 VSPPATCADSQDILP 353
           ++ P + A S+   P
Sbjct: 500 LASPVSSASSRSPAP 514


>BC127099-1|AAI27100.1|  649|Homo sapiens KIAA1683 protein protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +1

Query: 412 RVPPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAASPDTNAPDVLSYRSRR 591
           + PP +H VT   +NP      A  S   + ++ + +  P    SP T  P +++    +
Sbjct: 452 KTPPQMHPVTTPAKNPLQTCLSATMSKTSSQRSPVGVTKP----SPQTRLPAMITKTPAQ 507

Query: 592 LQNVSIFL 615
           L++V+  L
Sbjct: 508 LRSVATIL 515


>BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.
          Length = 1367

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +1

Query: 412 RVPPLLHDVTPTLRNPTANTCQARTSTHFTGKTCIRLRNPNTAASPDTNAPDVLSYRSRR 591
           + PP +H VT   +NP      A  S   + ++ + +  P    SP T  P +++    +
Sbjct: 452 KTPPQMHPVTTPAKNPLQTCLSATMSKTSSQRSPVGVTKP----SPQTRLPAMITKTPAQ 507

Query: 592 LQNVSIFL 615
           L++V+  L
Sbjct: 508 LRSVATIL 515


>AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated protein
           protein.
          Length = 165

 Score = 24.6 bits (51), Expect(2) = 8.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 565 PVRSCLAMRRCSGSAGGC 512
           P  SC +   C GS GGC
Sbjct: 50  PACSCSSCGSCGGSKGGC 67



 Score = 24.2 bits (50), Expect(2) = 8.2
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 535 CSGSAGGCRFFR*SACLCVLDKCSRLG 455
           C GS GGC     S C C    C   G
Sbjct: 80  CGGSKGGCGSCGCSQCSCYKPCCCSSG 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,564,710
Number of Sequences: 237096
Number of extensions: 2598780
Number of successful extensions: 8725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8710
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)