Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G11
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.060
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.14
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.32
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.42
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.42
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.42
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.73
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.73
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 6.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.0
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.060
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
P PP +PP P P P P P PP P PP
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXP 707
PP P P P P PP+ P P P P P PP P P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMC-PPPPPPMP 82
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = +3
Query: 588 PPXXXPXSPPRXXXPXXTXXP----XSXXXPXPXXXPXPPXPXPPXXXRXXXPXRXXXRP 755
PP P PP P P P P P PP P PP P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Query: 756 XXS 764
S
Sbjct: 87 CQS 89
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 552 PXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
P P P P P PP P P P P P P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPP-PICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/122 (22%), Positives = 32/122 (26%)
Frame = +3
Query: 369 PXXPXAPGPXAXXLLXXPTPXXRXPXXPXXXPXRXSPXXXXXXXXPRPXLXXXXXRXXXA 548
P P +PGP P+ P P SP P+P
Sbjct: 145 PSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPP---SPGPVDPSEDPQPS---GSSSPGPV 198
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXX 728
P P P P P P+ P P P P PP P P R
Sbjct: 199 DPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPP 258
Query: 729 XP 734
P
Sbjct: 259 GP 260
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXP-XPPXPXPPXXXRX 725
PP P P PP P PP P + P P P PP P PP R
Sbjct: 142 PPPRVPRTPPPRSPP---PRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRL 198
Query: 726 XXPXRXXXR 752
R R
Sbjct: 199 NSHDRRALR 207
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXX 728
PP P P P PP P P P P P PP P PP +
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 729 XP 734
P
Sbjct: 784 PP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXX 728
PP P P P PP P P P P P PP P PP +
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 729 XP 734
P
Sbjct: 784 PP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXX 728
PP P P P PP P P P P P PP P PP +
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 729 XP 734
P
Sbjct: 367 PP 368
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
P PP P PP P T P P P PP P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRP----PPPPSSGMWPPPPPPP 303
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/117 (23%), Positives = 28/117 (23%), Gaps = 1/117 (0%)
Frame = +3
Query: 363 PXPXXPXAPGPXAXXLLXXPTPXXRXPXXPXXXPXRX-SPXXXXXXXXPRPXLXXXXXRX 539
P P P P P P P P P R P P P
Sbjct: 272 PMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 330
Query: 540 XXAPPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
PP PG P P P P P S P P P PP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 31.1 bits (67), Expect = 0.97
Identities = 26/113 (23%), Positives = 27/113 (23%), Gaps = 2/113 (1%)
Frame = +3
Query: 378 PXAPGPXAXXLLXXPTPXXRXPXXPXXXPXRXSPXXXXXXXXPRPXLXXXXXRXXXAPPX 557
P P P + P P P P S P P PP
Sbjct: 261 PPVP-PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 558 XXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXP--XPXXXPXPPXPXPP 710
P P P PP P P P P P PP PP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
P PP P PP P T P P P PP P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRP----PPPPSSGMWPPPPPPP 313
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/117 (23%), Positives = 28/117 (23%), Gaps = 1/117 (0%)
Frame = +3
Query: 363 PXPXXPXAPGPXAXXLLXXPTPXXRXPXXPXXXPXRX-SPXXXXXXXXPRPXLXXXXXRX 539
P P P P P P P P P R P P P
Sbjct: 282 PMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 340
Query: 540 XXAPPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
PP PG P P P P P S P P P PP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 31.1 bits (67), Expect = 0.97
Identities = 26/113 (23%), Positives = 27/113 (23%), Gaps = 2/113 (1%)
Frame = +3
Query: 378 PXAPGPXAXXLLXXPTPXXRXPXXPXXXPXRXSPXXXXXXXXPRPXLXXXXXRXXXAPPX 557
P P P + P P P P S P P PP
Sbjct: 271 PPVP-PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 558 XXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXP--XPXXXPXPPXPXPP 710
P P P PP P P P P P PP PP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXX-TXXPXSXXXPXPXXXPXPPXPXPP 710
P PP SP P T P P P P PP P PP
Sbjct: 325 PPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/116 (25%), Positives = 30/116 (25%)
Frame = -1
Query: 709 GGXGXGGXGXXXGXGXXXXXGXSVXXGXXXRGGXXGXXXGGXXGXXXPGXXXGGAXXXRX 530
GG G GG G G G G G GG GG G G GG
Sbjct: 23 GGWG-GGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG----- 76
Query: 529 XXXXRXGRGXXXXXXXXGEXRXGXXXGXXGXRXXGVGXXRRXXAXGPGAXGXXGXG 362
G G G R G G G G G G G G
Sbjct: 77 -NWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGG 131
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 549 PPXXXP---GXXXPXXPPXXXPXSPPRXXXP-----XXTXXPXSXXXPXPXXXPXPPXPX 704
PP P G P PP PPR P P + P P PP P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Query: 705 PP 710
PP
Sbjct: 302 PP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 549 PPXXXP---GXXXPXXPPXXXPXSPPRXXXP-----XXTXXPXSXXXPXPXXXPXPPXPX 704
PP P G P PP PPR P P + P P PP P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Query: 705 PP 710
PP
Sbjct: 323 PP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 549 PPXXXP---GXXXPXXPPXXXPXSPPRXXXP-----XXTXXPXSXXXPXPXXXPXPPXPX 704
PP P G P PP PPR P P + P P PP P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Query: 705 PP 710
PP
Sbjct: 308 PP 309
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -1
Query: 709 GGXGXGGXGXXXGXGXXXXXGXSVXXGXXXRGGXXGX-XXGGXXGXXXPGXXXGGAXXXR 533
GG GG G G G G G GG G GG G G GG
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
Query: 532 XXXXXRXGRG 503
GRG
Sbjct: 125 GGGRGGGGRG 134
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +3
Query: 567 GXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXXXP 734
G P PP P +P + P P P P PP P P + P
Sbjct: 682 GTSAPARPPPARPEAPKKDETAVDAAAPPR---PPPAARPPPPRPAPANKEKPKEP 734
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPPXXXRXXXP 734
P P P PP P P P P P P P PP R P
Sbjct: 44 PMPMPMPMPVCPPPPPCP-AQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 579 PXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXP-PXPXPP 710
P P P +P T P P P P P P P PP
Sbjct: 227 PVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPP 271
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
PP G P P P PP P P P P P PP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 549 PPXXXPGXXXPXXPPXXXPXSPPRXXXPXXTXXPXSXXXPXPXXXPXPPXPXPP 710
PP P P P PP T P P P P P PP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,237,802
Number of Sequences: 27780
Number of extensions: 102317
Number of successful extensions: 741
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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