Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G09
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 46 5e-05
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 35 0.090
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.12
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.36
06_01_0486 - 3455030-3455770 31 0.84
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 1.9
05_04_0011 + 17139322-17139451,17139552-17140174 30 2.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.5
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 5.9
07_03_1136 + 24218601-24218734,24218769-24219906 28 7.8
05_02_0082 - 6447848-6448103,6448464-6448591 28 7.8
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 28 7.8
>12_02_1174 - 26696869-26698191
Length = 440
Score = 45.6 bits (103), Expect = 5e-05
Identities = 38/164 (23%), Positives = 47/164 (28%), Gaps = 7/164 (4%)
Frame = +2
Query: 167 PPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGX 346
PP PP P PP P P ++ + PP PP P +
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPS 200
Query: 347 GXXXXXFPKGGGPXXXPKILXXXXP---PXXSXXSXTSPKXQKHQXXXPSPRVXXXXPRK 517
PK P P P P + + K Q P PR PR
Sbjct: 201 VKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRV 260
Query: 518 IXSXPXP----XLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPP 637
+ P P LPP + TP P + PPP
Sbjct: 261 LEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPP 304
Score = 28.7 bits (61), Expect = 5.9
Identities = 33/170 (19%), Positives = 42/170 (24%), Gaps = 2/170 (1%)
Frame = +2
Query: 152 VQKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPX 331
VQ K P + PP P PP P PPP P +P
Sbjct: 175 VQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPG 234
Query: 332 GQAG--XGXXXXXFPKGGGPXXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSPRVXXX 505
P P P++L P P+ P
Sbjct: 235 DTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKP 294
Query: 506 XPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPPXPXHXP 655
P S P P P ++ TP + P + PP P
Sbjct: 295 KPPP-PSPPPPPQQPSQRYWTPPPAITPEPAKPAAGKPTSSSPPSTKDSP 343
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 34.7 bits (76), Expect = 0.090
Identities = 27/109 (24%), Positives = 30/109 (27%)
Frame = +2
Query: 167 PPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGX 346
PP PP P PP P P PPP + PP P G
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGV 101
Query: 347 GXXXXXFPKGGGPXXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSPR 493
P P P PP T P ++ Q P PR
Sbjct: 102 NSSQPPPPPPPPPSPPPSAPPPPPPP------PTQPPPREAQLAPPPPR 144
Score = 29.5 bits (63), Expect = 3.4
Identities = 31/126 (24%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Frame = +2
Query: 290 PPPXXGXFXPPSPXGQAGXGXXXXXFPKGGG----PXXXPKILXXXXPPXXSXXSXTSPK 457
PPP G F PP P G P G P L PP P
Sbjct: 11 PPPPQGGF-PPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQP- 68
Query: 458 XQKHQXXXPSPRVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPP 637
Q + P + P ++ P P PP P P + P PPP
Sbjct: 69 -QFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPP-PPPP 126
Query: 638 XPXHXP 655
P P
Sbjct: 127 PPTQPP 132
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.3 bits (75), Expect = 0.12
Identities = 35/167 (20%), Positives = 42/167 (25%), Gaps = 6/167 (3%)
Frame = +2
Query: 167 PPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGX 346
PP+ N P PP P P PPP PP P +
Sbjct: 625 PPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPP------PPPPRSSSRT 678
Query: 347 GXXXXXFPKGGGPXXXPKILXXXX------PPXXSXXSXTSPKXQKHQXXXPSPRVXXXX 508
KG P P + P P + + P+P +
Sbjct: 679 PTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPL 738
Query: 509 PRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPPXPXH 649
P P PP P P P T PPP P H
Sbjct: 739 PAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLH 785
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 173 VXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGX 352
V + PP P P P A PPP G PP P G +
Sbjct: 308 VASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Query: 353 XXXXFPKGGGPXXXPK 400
KGG P PK
Sbjct: 368 PPPGGKKGGPPPPPPK 383
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 188 PPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXF 367
PP PP P G P A PPP G PP P G
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPA-------KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Query: 368 PKGG 379
PKGG
Sbjct: 382 PKGG 385
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +2
Query: 167 PPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXG 334
PP PP PP P P + PPP G PP+ G
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +2
Query: 452 PKXQKHQXXXPSPRVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSA--CPXT 625
P+ H PSPR P + P P PP + P P + + P
Sbjct: 58 PEHHHHHKPPPSPRCPSCHPP--YTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPY 115
Query: 626 XPPPXPXHXP 655
PPP P + P
Sbjct: 116 IPPPTPPYVP 125
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +2
Query: 143 GXGVQKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPP 322
G G PP + P P P G P P P G PP
Sbjct: 315 GAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
Query: 323 SPXGQAGXGXXXXXFPKGGGP 385
G+ G G P GGP
Sbjct: 375 GAAGRGGGGPPPPALP--GGP 393
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 170 PVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSP 328
PV N P P PP P G + R GP P F PP P
Sbjct: 60 PVHNEFQPPPPPPPPSPPNGGN------VIGNGKRLTPTGPDPIHNEFQPPPP 106
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 170 PVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSP 328
P+ N P P PP P G + R GP P F PP P
Sbjct: 96 PIHNEFQPPPPPPPPSPPNGGK------VIGDGKRLTPTGPDPVHNKFQPPPP 142
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/111 (23%), Positives = 32/111 (28%), Gaps = 1/111 (0%)
Frame = +2
Query: 155 QKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPP-SPX 331
Q + PP+ + PP PP P + PPP PP SP
Sbjct: 1119 QNELPPLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSP- 1177
Query: 332 GQAGXGXXXXXFPKGGGPXXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXP 484
P G P P L PP +SP +Q P
Sbjct: 1178 -SLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSSLGYQPPAP 1227
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/76 (26%), Positives = 25/76 (32%)
Frame = +2
Query: 431 SXXSXTSPKXQKHQXXXPSPRVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXS 610
S + P+ Q+HQ P PR P P P PP P P ++
Sbjct: 149 SEAQRSRPQAQQHQQRPPPPRTRQVNPAP-PPVPSPSAPPLP-----PQPPPPRNQAQAD 202
Query: 611 ACPXTXPPPXPXHXPA 658
P PP PA
Sbjct: 203 KAPIPVAPPGAAVPPA 218
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 290 PPPXXGXFXPPS-PXGQAGXGXXXXXFPKGGGPXXXPK 400
PP G PPS P G G G P GGG P+
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPR 145
>05_02_0082 - 6447848-6448103,6448464-6448591
Length = 127
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 336 WPXGDGGXKXPXXGGG 289
WP GDGG P GGG
Sbjct: 77 WPAGDGGRGGPPRGGG 92
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 290 PPPXXGXFXPPSPXGQAG 343
PPP G F PPS G AG
Sbjct: 494 PPPSQGSFGPPSKGGYAG 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,456,351
Number of Sequences: 37544
Number of extensions: 253297
Number of successful extensions: 698
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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