Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G09
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.11
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 1.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.0
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 5/117 (4%)
Frame = +2
Query: 155 QKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPP---- 322
+++ PP + PP P G P A PPP G PP
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 323 SPXGQAGXGXXXXXFPKGGGP-XXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSP 490
SP P+G P P PP S P QK Q SP
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 5/117 (4%)
Frame = +2
Query: 155 QKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPP---- 322
+++ PP + PP P G P A PPP G PP
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 323 SPXGQAGXGXXXXXFPKGGGP-XXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSP 490
SP P+G P P PP S P QK Q SP
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 5/117 (4%)
Frame = +2
Query: 155 QKKXPPVXNXXPPXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPP---- 322
+++ PP + PP P G P A PPP G PP
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 323 SPXGQAGXGXXXXXFPKGGGP-XXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSP 490
SP P+G P P PP S P QK Q SP
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 4/82 (4%)
Frame = +2
Query: 191 PXKXPXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAG----XGXXX 358
P P PP P P G P G PP P GQAG G
Sbjct: 139 PQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPA 198
Query: 359 XXFPKGGGPXXXPKILXXXXPP 424
P GP P PP
Sbjct: 199 KSEPAVPGPPGPPGQAGQQGPP 220
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 4/82 (4%)
Frame = +2
Query: 143 GXGVQKKXPPVXNXXPPXKXPXPPXXPXX----GXXXXPXAIXXXXXRXXXXGPPPXXGX 310
G G P PP P PP P G P A GPP G
Sbjct: 188 GPGAPGNTPSGGAAGPPGP-PGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGP 246
Query: 311 FXPPSPXGQAGXGXXXXXFPKG 376
PP P G AG P G
Sbjct: 247 AGPPGPAGNAGQAGYAQPGPAG 268
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPK 373
P PP P P GPP G PP P G AG PK
Sbjct: 229 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKGICPK 285
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPK 373
P PP P P GPP G PP P G AG PK
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPK 280
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/116 (23%), Positives = 33/116 (28%), Gaps = 3/116 (2%)
Frame = +2
Query: 419 PPXXSXXSXTSPKXQKHQXXXPSPRVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHK 598
PP Q Q P P P++ P P P + P P
Sbjct: 30 PPPPKPAPYVEQSAQPQQTAPPPPPAPY--PQQAVPAPAPPPAPYPQH-AVPAPAPPLAS 86
Query: 599 XXXSACPXTXPP--PXPXH-XPAXXXGXRXXXVHXXXXAXPHXXXXXPXHPPQXFP 757
+A P PP P P H PA H P+ P PP +P
Sbjct: 87 YPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYP 142
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPK 373
P PP P P GPP G PP P G AG PK
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPK 280
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPKGGG 382
P P P G + + GPP G PP P G G P G G
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG-NPGSPAGPSGPG 183
Query: 383 PXXXP 397
P P
Sbjct: 184 PAGPP 188
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/145 (20%), Positives = 34/145 (23%)
Frame = +2
Query: 311 FXPPSPXGQAGXGXXXXXFPKGGGPXXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSP 490
+ PP G A G +P P + PP P P P
Sbjct: 243 YQPPPLMGMAQSGYQGQ-YPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Query: 491 RVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPPXPXHXPAXXXG 670
P P PP F P P PPP P P+ G
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
Query: 671 XRXXXVHXXXXAXPHXXXXXPXHPP 745
A P P PP
Sbjct: 362 MYPPPPPSRPPAPPSGHGMIPPPPP 386
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPKGGG 382
P P P G + + GPP G PP P G G P G G
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG-NPGSPAGPSGPG 183
Query: 383 PXXXP 397
P P
Sbjct: 184 PAGPP 188
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/145 (20%), Positives = 34/145 (23%)
Frame = +2
Query: 311 FXPPSPXGQAGXGXXXXXFPKGGGPXXXPKILXXXXPPXXSXXSXTSPKXQKHQXXXPSP 490
+ PP G A G +P P + PP P P P
Sbjct: 253 YQPPPLMGMAQSGYQGQ-YPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Query: 491 RVXXXXPRKIXSXPXPXLPPXXXFFXLXXPXTPXHKXXXSACPXTXPPPXPXHXPAXXXG 670
P P PP F P P PPP P P+ G
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
Query: 671 XRXXXVHXXXXAXPHXXXXXPXHPP 745
A P P PP
Sbjct: 372 MYPPPPPSRPPAPPSGHGMIPPPPP 396
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPKGGG 382
P P P G + + GPP G PP P G G P G G
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG-NPGSPAGPSGPG 183
Query: 383 PXXXP 397
P P
Sbjct: 184 PAGPP 188
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 203 PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSPXGQAGXGXXXXXFPKGGG 382
P P P G + + GPP G PP P G G P G G
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG-NPGSPAGPSGPG 183
Query: 383 PXXXP 397
P P
Sbjct: 184 PAGPP 188
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +2
Query: 287 GPPPXX-GXFXPPSPXGQAGXGXXXXXFPKGGGP 385
GPP G F PP P G G FP G P
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 167 PPVXNXXPPXKX-PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSP 328
PP PP P PP P G P + PPP G F P +P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-PPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 167 PPVXNXXPPXKX-PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSP 328
PP PP P PP P G P + PPP G F P +P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-PPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 167 PPVXNXXPPXKX-PXPPXXPXXGXXXXPXAIXXXXXRXXXXGPPPXXGXFXPPSP 328
PP PP P PP P G P + PPP G F P +P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-PPPPPGMFAPMAP 381
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 381 PPPLGXXXXXXPXPAWPXGDGGXKXPXXGGGP 286
PPP P PA P G G K P GP
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGP 165
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 381 PPPLGXXXXXXPXPAWPXGDGGXKXPXXGGGP 286
PPP P PA P G G K P GP
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGP 163
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 GPPPXXGXFXPPSPXGQAGXGXXXXXFPKG-GGPXXXP 397
GP G P P GQ+G G PKG GP P
Sbjct: 236 GPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQP 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,760,283
Number of Sequences: 27780
Number of extensions: 158677
Number of successful extensions: 665
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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