Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_G07
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         29   3.2  
09_02_0543 + 10427321-10428315,10428440-10429154                       29   4.3  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.6  
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623...    29   5.6  
03_05_0630 + 26260159-26260272,26260520-26260894                       28   7.4  
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    28   9.8  
09_04_0430 + 17502387-17503505                                         28   9.8  
08_01_0059 - 394001-394708                                             28   9.8  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/65 (24%), Positives = 18/65 (27%)
 Frame = +3

Query: 420 PPPXXPXXGXXPXXRXIXPXPQXHLXSPPXXLXPXXXXXPXPPXXPXXXXXIXARHXAPX 599
           PPP  P     P    + P        PP  L P     P P   P     +      P 
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213

Query: 600 AAXPP 614
              PP
Sbjct: 214 PTLPP 218


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 638 PXXRXSPXXPXPRXPPQXXPPPDXPXXXXP 727
           P  + SP  P P   PQ  PPP  P    P
Sbjct: 7   PIQQDSPAPPRPTPAPQATPPPAIPESGPP 36


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 656 PXXPXPRXPPQXXPPPDXPXXXXPXR 733
           P  P P  PP   PPP  P    P R
Sbjct: 109 PPPPPPSPPPSAPPPPPPPPTQPPPR 134


>01_06_1330 -
           36361275-36361448,36361778-36361973,36362248-36362325,
           36362685-36362807,36363206-36363463,36363914-36364073,
           36364702-36364812,36365159-36365429,36365514-36365663,
           36366383-36367090
          Length = 742

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +2

Query: 416 STPPXSSXXXXXPTXTXNXPXPSXXPPIPPA 508
           STPP S      P  +   P P   PP PPA
Sbjct: 87  STPPASPTANASPPPSLPPPPPPLRPPPPPA 117


>03_05_0630 + 26260159-26260272,26260520-26260894
          Length = 162

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 732 RXGXXXXGXSGGGXXWGGXRGXGXXG 655
           R G    G  GGG  +GG RG G  G
Sbjct: 88  RSGGGGGGYGGGGGGYGGGRGGGGYG 113


>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +2

Query: 638 PXXRXSPXXPXPRXPPQXXPPPDXPXXXXP 727
           P    S   P P+ PP   PPP  P    P
Sbjct: 65  PHHHVSAAPPPPQTPPSPPPPPPPPPPPPP 94


>09_04_0430 + 17502387-17503505
          Length = 372

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 647 RXSPXXPXPRXPPQXXPPPDXPXXXXPXR 733
           R +P    PR PPQ  PP   P    P R
Sbjct: 178 RAAPLPTPPRAPPQSTPPRAAPQSTPPQR 206


>08_01_0059 - 394001-394708
          Length = 235

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
 Frame = +3

Query: 420 PPPXXPXXGXXPXX-RXIXPXPQXHLXSPPXXLXPXXXXXPXPPXXP 557
           PPP  P     P   R   P P  H  +PP          P PP  P
Sbjct: 26  PPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPP 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,733,857
Number of Sequences: 37544
Number of extensions: 201875
Number of successful extensions: 1642
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)