Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_G05
(1085 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.068
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 31 0.37
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 0.58
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.86
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.86
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 1.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 6.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 6.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect(2) = 0.068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 961 PPPPPPPPP 935
PPPPPPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 972 PPPPPPPPP 998
PPPPPPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 982 GGGGXXXPPPPPPPP 938
G G PPPPPPPP
Sbjct: 769 GVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 951 GGGGXXXPPPPPPPP 995
G G PPPPPPPP
Sbjct: 769 GVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 960 PPPPPPPP 937
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 958 PPPPPPPP 935
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 972 PPPPPPPP 995
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 985 GGGGGXXXPPPPPPP 941
G G PPPPPPP
Sbjct: 769 GVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 948 GGGGGXXXPPPPPPP 992
G G PPPPPPP
Sbjct: 769 GVAGAGPPPPPPPPP 783
Score = 22.2 bits (45), Expect(2) = 0.068
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 973 GXXXPPPPPP 944
G PPPPPP
Sbjct: 759 GGPPPPPPPP 768
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 991 GGGGGGGXXXPPPPPPPPP 935
G GG PPPPPPPPP
Sbjct: 298 GDSANGGL--PPPPPPPPP 314
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 942 GGGGGGGXXXPPPPPPPPP 998
G GG PPPPPPPPP
Sbjct: 298 GDSANGGL--PPPPPPPPP 314
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect(2) = 0.58
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 988 GGGGGGXXXPPPPPPP 941
G G PPPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 27.5 bits (58), Expect(2) = 0.58
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 945 GGGGGGXXXPPPPPPP 992
G G PPPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 985 GGGGGXXXPPPPPPPP 938
G G PPPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect(2) = 1.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 948 GGGGGXXXPPPPPPPP 995
G G PPPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -2
Query: 991 GGGGGGGXXXPPPPPP 944
G G PPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 942 GGGGGGGXXXPPPPPP 989
G G PPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 22.2 bits (45), Expect(2) = 9.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 973 GXXXPPPPPP 944
G PPPPPP
Sbjct: 357 GRSAPPPPPP 366
Score = 22.2 bits (45), Expect(2) = 9.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 960 GXXXPPPPPP 989
G PPPPPP
Sbjct: 357 GRSAPPPPPP 366
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = -2
Query: 994 GGGGGGGGXXXPPPPP 947
G G PPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = +3
Query: 939 GGGGGGGGXXXPPPPP 986
G G PPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 21.0 bits (42), Expect(2) = 3.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 955 PPPPPP 938
PPPPPP
Sbjct: 361 PPPPPP 366
Score = 21.0 bits (42), Expect(2) = 0.58
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 952 PPPPPP 935
PPPPPP
Sbjct: 361 PPPPPP 366
Score = 21.0 bits (42), Expect(2) = 3.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 975 PPPPPP 992
PPPPPP
Sbjct: 361 PPPPPP 366
Score = 21.0 bits (42), Expect(2) = 0.58
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 978 PPPPPP 995
PPPPPP
Sbjct: 361 PPPPPP 366
Score = 21.0 bits (42), Expect(2) = 1.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 981 PPPPPP 998
PPPPPP
Sbjct: 361 PPPPPP 366
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 961 PPPPPPPPP 935
PPPPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 29.5 bits (63), Expect = 0.86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 972 PPPPPPPPP 998
PPPPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 8.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 961 PPPPPPPPP 935
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
Score = 26.2 bits (55), Expect = 8.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 972 PPPPPPPPP 998
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 961 PPPPPPPPP 935
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 29.5 bits (63), Expect = 0.86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 972 PPPPPPPPP 998
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 972 PPPPPPPP 995
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 22.6 bits (46), Expect(2) = 2.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPP P
Sbjct: 907 PPPPPPLP 914
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 972 PPPPPPPP 995
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPP P
Sbjct: 5 PPPPPPAP 12
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 960 PPPPPPPP 937
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 958 PPPPPPPP 935
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 972 PPPPPPPP 995
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
Frame = -2
Query: 961 PP--PPPPPPP 935
PP PPPPPPP
Sbjct: 20 PPSQPPPPPPP 30
Score = 22.2 bits (45), Expect(2) = 1.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 973 GXXXPPPPPP 944
G PPPPPP
Sbjct: 7 GNPPPPPPPP 16
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 997 GGGGGGGGGXXXPPPPP 947
GG GG GGG PPP P
Sbjct: 188 GGFGGFGGGSGGPPPGP 204
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 936 GGGGGGGGGXXXPPPPP 986
GG GG GGG PPP P
Sbjct: 188 GGFGGFGGGSGGPPPGP 204
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 961 PPPPPPPP 938
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 958 PPPPPPPP 935
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 972 PPPPPPPP 995
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 961 PPPPPPPP 938
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 958 PPPPPPPP 935
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 972 PPPPPPPP 995
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 975 PPPPPPPP 998
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,910,670
Number of Sequences: 5004
Number of extensions: 24505
Number of successful extensions: 423
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 571756234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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