Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_F17
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    25   9.1  
AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like ...    25   9.2  

>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 24.6 bits (51), Expect(2) = 9.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 518 PXPPPPXGGG 547
           P PPPP GGG
Sbjct: 41  PPPPPPCGGG 50



 Score = 21.8 bits (44), Expect(2) = 9.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 407 PPPPPXXXGG 436
           PPPPP   GG
Sbjct: 40  PPPPPPPCGG 49


>AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like
           (grd related) protein20 protein.
          Length = 163

 Score = 24.6 bits (51), Expect(2) = 9.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 518 PXPPPPXGGG 547
           P PPPP GGG
Sbjct: 64  PPPPPPCGGG 73



 Score = 21.8 bits (44), Expect(2) = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 407 PPPPPXXXGG 436
           PPPPP   GG
Sbjct: 63  PPPPPPPCGG 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,454,908
Number of Sequences: 27780
Number of extensions: 134251
Number of successful extensions: 1107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)