BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_F10
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1160 - 24430240-24431268 41 0.001
04_03_0904 + 20717005-20718087 40 0.003
12_02_1174 - 26696869-26698191 38 0.009
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.46
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 31 1.4
12_01_0442 + 3495333-3496484 29 3.2
04_04_1125 + 31085106-31085714 29 4.3
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.7
11_01_0066 - 536281-537196,537397-537452 29 5.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.7
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 29 5.7
06_01_0486 - 3455030-3455770 29 5.7
04_03_1022 - 21778315-21779007 29 5.7
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 5.7
11_06_0610 - 25449085-25453284 28 7.5
11_01_0385 + 2915532-2916482 28 7.5
01_06_0146 + 26969011-26969995,26970878-26970930 28 7.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.9
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 28 9.9
>07_03_1160 - 24430240-24431268
Length = 342
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/116 (24%), Positives = 30/116 (25%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P N P P PP P P D P P P P P+
Sbjct: 218 PNPNGPSIPNQPPQPIPNGPIKPDQPPQPNPDMPPKPDQPPQPCPDGPPKPDQPPQPNPN 277
Query: 526 XXPXPXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXP 693
P P PP P P + P P P PP PP P
Sbjct: 278 GPPKPDQPPQPN-----PNGPSKPDQPPRPNPDMPPKPDQPPQPEYYEQPPKPDAP 328
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/109 (22%), Positives = 27/109 (24%), Gaps = 1/109 (0%)
Frame = +1
Query: 379 PPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXPXXPPXP 558
PP P P D P P P P + S P P P P
Sbjct: 167 PPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVPDQSTQPNPNGPSIP 226
Query: 559 -XAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXPXNN 702
P +P P P P PP P + P N
Sbjct: 227 NQPPQPIPNGPIKPDQPPQPNPDMPPKPDQPPQPCPDGPPKPDQPPQPN 275
>04_03_0904 + 20717005-20718087
Length = 360
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXP--YPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXX 519
P P P P +P P Y P TP S P PK T
Sbjct: 136 PYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTP 195
Query: 520 PSXXPXPXXPPXPXAPLXLPXS-*TXPRXXPXXRTQXXXXPGSPP 651
PS P P P P P P S P+ P + P PP
Sbjct: 196 PSYKPQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPP 240
Score = 34.7 bits (76), Expect = 0.086
Identities = 34/148 (22%), Positives = 40/148 (27%), Gaps = 3/148 (2%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXX-PY-PFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXX 519
P P P P +P PY P P P + P PK T
Sbjct: 116 PTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTP 175
Query: 520 PSXXPXPXXPPXPXAPLXLPXS-*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXPX 696
PS P P P P P P S P+ P T P P P P
Sbjct: 176 PSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPK 235
Query: 697 NNAXXXLAXXXGTSXXXXXPSADXXFRP 780
N T P+ ++P
Sbjct: 236 PNPPPTYKPAPPTYKPQPKPNPPPTYKP 263
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/106 (23%), Positives = 29/106 (27%), Gaps = 4/106 (3%)
Frame = +1
Query: 346 PXXNXPXX--PXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXX 519
P N P P P P P + P TP P + P T
Sbjct: 253 PKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTP 312
Query: 520 PSXXPXPXXPPXPXAP--LXLPXS*TXPRXXPXXRTQXXXXPGSPP 651
P P P P P P + T P + PG PP
Sbjct: 313 TPYKPQPKPTPSPYTPKPTPTPPTYTPTPTPPYHKPPPSYTPGPPP 358
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/98 (25%), Positives = 29/98 (29%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P P P +P P P+ P TP + PTP P P
Sbjct: 75 PPKPTPTPPTYTPTPKPTPP-PYTPKP--TPPAHTPTPPTYTPTPTPPKPTPPTYKPQPK 131
Query: 526 XXPXPXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXP 639
P P P P P P P P + Q P
Sbjct: 132 PTPAP-YTPTPTPPTYKPQ--PKPTPPPTYKPQPKPTP 166
>12_02_1174 - 26696869-26698191
Length = 440
Score = 37.9 bits (84), Expect = 0.009
Identities = 34/141 (24%), Positives = 39/141 (27%)
Frame = +1
Query: 361 PXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXP 540
P PP P P PGDTP P P++ P PS P
Sbjct: 212 PPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPS 271
Query: 541 XXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXPXNNAXXXLA 720
PP P P + T P T+ P SPP + P
Sbjct: 272 PLPP-PPEDYWSPTAVTPPEP-----TKPKPPPPSPPPPPQQPSQRYWTPPPAITPEPAK 325
Query: 721 XXXGTSXXXXXPSADXXFRPP 783
G PS RPP
Sbjct: 326 PAAGKPTSSSPPSTKDSPRPP 346
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P P PP RP P P P P P P T
Sbjct: 182 PPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVE 241
Query: 526 XXPXPXXPPXPXAPLXLP 579
P P PP P AP+ +P
Sbjct: 242 PKPQP-PPPPPRAPVKMP 258
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/119 (23%), Positives = 29/119 (24%), Gaps = 3/119 (2%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P PP P P P P P P P P P+
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPT 196
Query: 526 XXP---XPXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXP 693
P P P P P LP P P T PG P P P
Sbjct: 197 RPPSVKPPVVQPKPQPPPTLP----PPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPP 251
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.46
Identities = 25/106 (23%), Positives = 29/106 (27%), Gaps = 2/106 (1%)
Frame = +1
Query: 382 PXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXPXXPPXPX 561
P P P P P + S P P P S P P PP P
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 562 APLXLPXS*TXPRXXP--XXRTQXXXXPGSPPXXXRXXVPPXXRXP 693
+P P P R+ P PP +PP P
Sbjct: 595 PNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPP 640
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/135 (22%), Positives = 38/135 (28%), Gaps = 4/135 (2%)
Frame = +2
Query: 299 EVGDEAPERRGRRAXTPXXTPXTXPXXXPXHAPXXXTPSTXXPATPXVAXLPXLTXAXXX 478
EV E+P R + +P P P P P+ P P P L +
Sbjct: 523 EVQHESPSDRKLPSPSPTAAAPPPPPPPPP-PPSGNKPAFSPPPPPPPPPPPPLPQSNYA 581
Query: 479 RNRXXPPPP----XXLXXXXPXPXXXXXPXXXPRSXSLXAEXXXASPXXPEXKXXPXPEA 646
++ PPPP P P P RS P P P
Sbjct: 582 SSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPP 641
Query: 647 XPNXXGXLXPRXXGP 691
P+ L P P
Sbjct: 642 PPSLPNRLVPPPPAP 656
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +2
Query: 371 PXXXPXHAPXXXTPSTXXPATPXVAXLPXLTXAXXXRNRXXPPPPXXLXXXXPXPXXXXX 550
P P P + P+ P P L A RN PPPP L P
Sbjct: 709 PSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP-PLMTGKKAPAPPPP 767
Query: 551 PXXXPR 568
P P+
Sbjct: 768 PPQAPK 773
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 365 TXPXXXPXHAPXXX-TPSTXXPATPXVAXLPXLTXAXXXRNRXXPPPPXXLXXXXPXPXX 541
T P AP TP+ P++ + LP T + PPPP P P
Sbjct: 68 TAPVLLTTAAPALAPTPTPPPPSSTASSSLPPPTPLLPKHQQAPPPPPPTQSHQPPPPVA 127
Query: 542 XXXPXXXPR 568
P PR
Sbjct: 128 VRAPRGGPR 136
>12_01_0442 + 3495333-3496484
Length = 383
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 424 PGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXPXXPPXPXAP 567
PG P + TPK P T P P P PP P P
Sbjct: 181 PGHKPPSSSPDIYLVRRTPKLPVTRPPRTKQAPPTAPAPAPPPPPPQP 228
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/92 (23%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Frame = +1
Query: 424 PGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXPXXPP--XPXAPLXLPXS*TXP 597
P C + P P P T P+ P P PP P P P + T
Sbjct: 24 PAAATWCGSNCPTTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPA 83
Query: 598 RXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXP 693
P T P +PP P + P
Sbjct: 84 TPPPTPAT--PATPTTPPTPAPAPSTPTGKCP 113
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/69 (26%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +1
Query: 355 NXPXXPXXPPXXRPXXPYPFDXXPGDTP-GCXXXXSHSXXPTPKSXXXXPXXTXXXPSXX 531
N P PP +P P P P P + PTP P P+
Sbjct: 33 NCPTTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATP 92
Query: 532 PXPXXPPXP 558
P PP P
Sbjct: 93 ATPTTPPTP 101
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 3/100 (3%)
Frame = +1
Query: 361 PXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXX-PSXX-- 531
P P P P P+P P TP + P P P
Sbjct: 227 PPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSP 286
Query: 532 PXPXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPP 651
P P PP P P P P P P PP
Sbjct: 287 PSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/73 (26%), Positives = 22/73 (30%)
Frame = +1
Query: 361 PXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXP 540
P P P RP P P P P P P S P + + P
Sbjct: 195 PAPPTPPTIARPPRPLPPASPP--PPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASP 252
Query: 541 XXPPXPXAPLXLP 579
PP P A + P
Sbjct: 253 TPPPIPTATVRPP 265
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P PP P P P P TP S S P P P P+
Sbjct: 1143 PEGPPPLPSDSPPCQPPLPPSP----PPATPPPPPPLSPS-LPPPPPPPPLPSGPPPQPA 1197
Query: 526 XXPXPXXPPXPXAPLXLPXS 585
P P PP P P +P S
Sbjct: 1198 PPPLPIQPP-PIPPPPVPSS 1216
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +1
Query: 520 PSXXPXPXXPPXPXAPLXLP-XS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPPXXRXPX 696
P P P PP P AP P + P P P PP + P P
Sbjct: 1157 PPPPPPPLPPPPPVAPFHPPGPHFSGPSVPPHHGNNYHQPPSVPPPNNAYHLQPPPHPPF 1216
Query: 697 NN 702
N
Sbjct: 1217 PN 1218
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/82 (26%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Frame = +1
Query: 460 HSXXPTPKSXXXXPXXTXXXPSXXPXP--XXPPXPXAPLXLPXS*TXPRXXP--XXRTQX 627
H P+P+ P T P P P P P P +P T P P T
Sbjct: 64 HKPPPSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPP-TPPYVPPYIPPPTPP 122
Query: 628 XXXPGSPPXXXRXXVPPXXRXP 693
P +PP PP P
Sbjct: 123 YVPPPTPPSPPPYVPPPTPPSP 144
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/78 (25%), Positives = 21/78 (26%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P P PP P P P P P + P P P P
Sbjct: 86 PPPTPPYVPSPPPYVPPYIPPP---TPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPP 142
Query: 526 XXPXPXXPPXPXAPLXLP 579
P PP P A P
Sbjct: 143 SPPPYVPPPSPPATKTCP 160
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/107 (23%), Positives = 27/107 (25%), Gaps = 4/107 (3%)
Frame = +1
Query: 370 PXXPPXXRPXXP----YPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPX 537
P PP R P + P P H P+P P P
Sbjct: 17 PPPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPHLLPPSPAPQQWYDHPPNYHPPHTPA 76
Query: 538 PXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPP 678
P P P P P P P T G PP V P
Sbjct: 77 PAPAPGPYIPPHHPHHHHPPTPAPAPSTTPGGHGGVPPYYPPPPVTP 123
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/74 (27%), Positives = 23/74 (31%)
Frame = +1
Query: 427 GDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPXPXXPPXPXAPLXLPXS*TXPRXX 606
GD+P S P P P T P+ P P PP P LP P
Sbjct: 115 GDSPFVDAPEHISPPPPPPPPARTPMPTPT-PTPTPTPTRPPVPVWAAPLPARTPTPTPS 173
Query: 607 PXXRTQXXXXPGSP 648
R G+P
Sbjct: 174 APPRAAAPSPAGTP 187
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/93 (23%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Frame = +2
Query: 383 PXHAPXXXTPSTXXPATPXVAXLPXLTXAXXXRN---RXXPPPPXXLXXXXPXPXXXXXP 553
P H+P PS P +P + T A P PP P P P
Sbjct: 782 PPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSP 841
Query: 554 XXXPRSXSLXAEXXXASPXXPEXKXXPXPEAXP 652
S E + P P PE P
Sbjct: 842 PPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSP 874
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/111 (21%), Positives = 29/111 (26%), Gaps = 5/111 (4%)
Frame = +1
Query: 361 PXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPSXXPX- 537
P P P P + P P + P P + P P P
Sbjct: 1084 PISPPETPEKSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVS 1143
Query: 538 ----PXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPPXXXRXXVPP 678
P P P AP+ LP P SPP +PP
Sbjct: 1144 SPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPP 1194
>11_01_0385 + 2915532-2916482
Length = 316
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/78 (24%), Positives = 20/78 (25%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P N P P P P P P TP + P P P
Sbjct: 183 PPFNQPPTPEWPHPGNKWPPLP-PFHPPPTPAWPHPGGNKWPPLPPFPSHPPPTPAWPQP 241
Query: 526 XXPXPXXPPXPXAPLXLP 579
P PP P P P
Sbjct: 242 GNKWPPLPPFPSHPPPTP 259
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 28.3 bits (60), Expect = 7.5
Identities = 29/106 (27%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Frame = +1
Query: 343 HPXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXP 522
HP P PP P P P P P + + PT S + P
Sbjct: 22 HPPPPTPHPATDPPPISPQNPTP---PPPPLP------ASAAAPTTPSPNHSGDPSRPIP 72
Query: 523 SXXPXPXXPP--XPXAPLXLPXS*TXPRXXPXXR-TQXXXXPGSPP 651
S P P PP P PL PR P P SPP
Sbjct: 73 SQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSPP 118
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/102 (24%), Positives = 25/102 (24%)
Frame = +1
Query: 346 PXXNXPXXPXXPPXXRPXXPYPFDXXPGDTPGCXXXXSHSXXPTPKSXXXXPXXTXXXPS 525
P P PP P P P PG P P S
Sbjct: 44 PQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNS 103
Query: 526 XXPXPXXPPXPXAPLXLPXS*TXPRXXPXXRTQXXXXPGSPP 651
P P PP P P P P P R P PP
Sbjct: 104 SQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP--PP 143
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 240 HHALCSHDHSGSGVRSQVLERLEMRLRSGGGGAR 341
H A C+ D G GVR + + RLR+G G+R
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSR 1402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,366,777
Number of Sequences: 37544
Number of extensions: 210787
Number of successful extensions: 1092
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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