Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_F05
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.17
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.17
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.17
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.40
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.93
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 0.93
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 0.93
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 2.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 2.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 2.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKXGGX---GGGXXPXFXX--GXPXXXPPPXXXXKKXGPPP 465
PPPP PP GG GG P G P PPP K GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 0.40
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Frame = -1
Query: 622 PPPPXXXXFFFXXPPXXXXRGGX----GGGXXPXFXXGXXXXXPPPXX--GXKXGXPPPF 461
PPPP PP GG GG P G PPP G K G PPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 460 FXGGXNXXXPFXXXXKKXXPPXKKP 386
G P PP K P
Sbjct: 789 PPG---MFAPMAPVIPDYLPPKKVP 810
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKXGGX---GGGXXPXFXX--GXPXXXPPPXXXXKKXGPPP 465
PPPP PP GG GG P G P PPP K GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 0.40
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Frame = -1
Query: 622 PPPPXXXXFFFXXPPXXXXRGGX----GGGXXPXFXXGXXXXXPPPXX--GXKXGXPPPF 461
PPPP PP GG GG P G PPP G K G PPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 460 FXGGXNXXXPFXXXXKKXXPPXKKP 386
G P PP K P
Sbjct: 789 PPG---MFAPMAPVIPDYLPPKKVP 810
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKXGGX---GGGXXPXFXX--GXPXXXPPPXXXXKKXGPPP 465
PPPP PP GG GG P G P PPP K GPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.9 bits (69), Expect = 0.40
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Frame = -1
Query: 622 PPPPXXXXFFFXXPPXXXXRGGX----GGGXXPXFXXGXXXXXPPPXX--GXKXGXPPPF 461
PPPP PP GG GG P G PPP G K G PPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 460 FXGGXNXXXPFXXXXKKXXPPXKKP 386
G P PP K P
Sbjct: 372 PPG---MFAPMAPVIPDYLPPKKVP 393
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Frame = -1
Query: 622 PPPPXXXXFFFXX---PPXXXXRGGXGGGXXPXFXXGXXXXX---PPPXXGXKXGXPPPF 461
PPP F PP +G G P F G PPP G PPP
Sbjct: 727 PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPS 786
Query: 460 FXGG 449
F GG
Sbjct: 787 FRGG 790
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -1
Query: 622 PPPPXXXXFFFXXPPXXXXRGGXGGGXXPXFXXGXXXXXPPPXXGXKXGXPPPF 461
PPPP PP RGG GG P PPP + G PPF
Sbjct: 771 PPPPRGG--MHHMPPPPSFRGGRGGHGGP----------PPPHFDRRGGGGPPF 812
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 466 GGGPXFXXXXXGGGKXXGXPXXKXGXXPPPXPPXFXXXGGXKKKXXXXXGGGG 624
GGG GGG G G PPP PP GG GGGG
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP--ACGGGCGGGGGGCGGGGG 77
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKXGGXGGGXXPXF----XXGXPXXXPPPXXXXKKXGPPP 465
PPPP ++ PP + G GG P P PPP + G PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKXGGXGGGXXPXF----XXGXPXXXPPPXXXXKKXGPPP 465
PPPP ++ PP + G GG P P PPP + G PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = -3
Query: 563 GGXGG-GXXPXFXXGXPXXXPPPXXXXKKXGPPPFFXXGXKPXXP 432
GG GG G P F G P P GPPP G P P
Sbjct: 125 GGPGGPGGPPPF--GQPFQQAPQGMFNVPTGPPPLMGGGGDPRGP 167
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = -3
Query: 563 GGXGG-GXXPXFXXGXPXXXPPPXXXXKKXGPPPFFXXGXKPXXP 432
GG GG G P F G P P GPPP G P P
Sbjct: 405 GGPGGPGGPPPF--GQPFQQAPQGMFNVPTGPPPLMGGGGDPRGP 447
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = -3
Query: 623 PPPPXXXXFFFXXPPXXXKX----GGXGG-GXXPXFXXGXPXXXPPPXXXXKKXGPPP 465
PPP F PP GG GG G P G P PP GPPP
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,543,233
Number of Sequences: 27780
Number of extensions: 220479
Number of successful extensions: 515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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