Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_F02
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 36 0.051
11_06_0610 - 25449085-25453284 29 3.4
11_01_0553 - 4368233-4368320,4368427-4368514,4368595-4368668,436... 29 3.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 5.9
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.9
07_03_0177 - 14770777-14772045 28 7.8
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 7.8
>12_02_1174 - 26696869-26698191
Length = 440
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +1
Query: 511 PPXPXXSXPXXXLPPXTXNHXXQSPXXXPIPXXRXXSXKXXPXXSXPXXPPXLPXPXXXX 690
PP P P P Q P P P R S K P PP LP P
Sbjct: 164 PPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPP 223
Query: 691 XPP 699
PP
Sbjct: 224 PPP 226
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/122 (22%), Positives = 29/122 (23%), Gaps = 3/122 (2%)
Frame = +2
Query: 350 PPPXPXXXXNXXASPGGTPXXXXXSXPXXXXTXXXPPXXXPLGXSXNXXXXXXSPQXPXL 529
PPP P P P P PP P + P+
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPP 182
Query: 530 PXXXPXSPPXQXTT---XXKAXXXXQFPXXGXXXXXXXPXXPPPXXPXXXPXPXXXXXPP 700
P P SPP T K P P PPP P P P
Sbjct: 183 PSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEP 242
Query: 701 XP 706
P
Sbjct: 243 KP 244
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.4
Identities = 32/137 (23%), Positives = 34/137 (24%), Gaps = 1/137 (0%)
Frame = +2
Query: 344 AEPPPXPXXXXNXXASPGGTPXXXXXSXPXXXXTXXXPPXXXPLGXSXNXXXXXXSPQXP 523
+EPPP + SP TP S P PP P S P
Sbjct: 1071 SEPPPAKSSPPHEPISPPETPEK---SYPPSTPEESSPPSV-PKASSPPTEKSLPPPATV 1126
Query: 524 XLPXXXPXSPPXQXTTXXKAXXXXQFPXXGXXXXXXXPXX-PPPXXPXXXPXPXXXXXPP 700
LP P P P PPP P P P PP
Sbjct: 1127 SLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPP 1186
Query: 701 XPXVXXXXXPXXLXRPP 751
V P PP
Sbjct: 1187 PAPVILPPPPVKSPPPP 1203
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/133 (21%), Positives = 34/133 (25%)
Frame = +2
Query: 353 PPXPXXXXNXXASPGGTPXXXXXSXPXXXXTXXXPPXXXPLGXSXNXXXXXXSPQXPXLP 532
PP P + + P TP S P PP P G + P P
Sbjct: 694 PPPPAPEGHMPSPPKSTPPVEK-SPPTPESEASSPPPPAPEGHT---------PSPPKSS 743
Query: 533 XXXPXSPPXQXTTXXKAXXXXQFPXXGXXXXXXXPXXPPPXXPXXXPXPXXXXXPPXPXV 712
SPP T+ ++ PPP P P P P
Sbjct: 744 PPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSE 803
Query: 713 XXXXXPXXLXRPP 751
P PP
Sbjct: 804 KSPPTPAEESSPP 816
>11_01_0553 -
4368233-4368320,4368427-4368514,4368595-4368668,
4369000-4369160,4369233-4369322,4369406-4369480,
4369569-4369640,4369719-4369891,4369964-4370078,
4370274-4370387,4370582-4370661,4370755-4370842,
4370941-4370997,4371111-4371176,4371254-4371349,
4371459-4371566,4371941-4372039,4372108-4372227,
4372399-4372437,4372940-4373026,4373276-4373347,
4373443-4373509,4374455-4374546,4374631-4374708,
4374785-4374922,4375029-4375164,4375306-4375468,
4375690-4375849,4375950-4376056,4376149-4376259,
4377850-4378159
Length = 1107
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 326 RXGWRAAEPPPXPXXXXNXXASPGGTP 406
R G R PPP P A PGGTP
Sbjct: 6 RGGKRRGAPPPGPSGAAAKRAHPGGTP 32
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 350 PPPXPXXXXNXXASPGGTPXXXXXSXPXXXXTXXXPPXXXPLGXSXNXXXXXXSPQXPXL 529
PPP P P G P S P PP P P P L
Sbjct: 1129 PPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPL 1188
Query: 530 PXXXPXSP 553
P P P
Sbjct: 1189 PSGPPPQP 1196
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/78 (24%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = +2
Query: 521 PXLPXXXPXSPPX-QXTTXXKAXXXXQFPXXGXXXXXXXPXXPPPXXPXXXPXPXXXXXP 697
P LP P PP + + P P PPP P P P P
Sbjct: 1130 PPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
Query: 698 PXPXVXXXXXPXXLXRPP 751
P P + PP
Sbjct: 1190 SGPPPQPAPPPLPIQPPP 1207
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 5.9
Identities = 29/124 (23%), Positives = 30/124 (24%), Gaps = 1/124 (0%)
Frame = +2
Query: 338 RAAEPPPXPXXXXNXXASPGGTPXXXXXSX-PXXXXTXXXPPXXXPLGXSXNXXXXXXSP 514
R PPP P A P P S P T P P P
Sbjct: 648 RLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPP-PPPLPPANRTNGP 706
Query: 515 QXPXLPXXXPXSPPXQXTTXXKAXXXXQFPXXGXXXXXXXPXXPPPXXPXXXPXPXXXXX 694
P P P PP + A P P PPP P
Sbjct: 707 GVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPP--PPLMTGKKAPAP 764
Query: 695 PPXP 706
PP P
Sbjct: 765 PPPP 768
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/109 (22%), Positives = 26/109 (23%), Gaps = 1/109 (0%)
Frame = +2
Query: 428 PXXXXTXXXPPXXXPLGXSXNXXXXXXSPQXPXLPXXXPXSPPXQXTTXXKAXXXXQFPX 607
P T PP P + SP P P P P + P
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 608 XGXXXXXXXPXXPPP-XXPXXXPXPXXXXXPPXPXVXXXXXPXXLXRPP 751
P PPP P P PP P P PP
Sbjct: 595 PNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 PPXPXXSXPXXXLPPXTXNHXXQSPXXXPIPXXRXXSXKXXPXXSXPXXPPXL-PXPXXX 687
PP P P P + P P+P S + P P P L P P
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
Query: 688 XXPP 699
PP
Sbjct: 606 PPPP 609
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 508 FPPXPXXSXPXXXLPPXTXNHXXQSPXXXPIPXXRXXSXKXXPXXSXPXXPPXLPXPXXX 687
FPP P P PP P P P + P P PP LP P
Sbjct: 382 FPPPPP---PPDTRPPFMAPGVNARPLPPPPPGLPPAQMQMAPFGVPPGPPPMLPPPFYP 438
Query: 688 XXP 696
P
Sbjct: 439 GPP 441
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -1
Query: 697 GGXXXRGGGXXXGXXWGXXXRGXXXXXXAXXGELXXXXGFGXXGXLXRG-GXGXXXRKXX 521
GG GGG G G G G L G G G L G G G K
Sbjct: 270 GGGGGLGGGEDGGLGGGIGKGGGIGGGFGKGGGLGGGGGLGGGGGLGGGSGLGGGIGKGG 329
Query: 520 VLGG 509
LGG
Sbjct: 330 GLGG 333
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 635 PXXPPPXXPXXXPXPXXXXXPPXPXVXXXXXP 730
P PPP P P P PP P + P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPP 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,056,780
Number of Sequences: 37544
Number of extensions: 180559
Number of successful extensions: 987
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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