Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_E15
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 5.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.9
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.9
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/84 (23%), Positives = 23/84 (27%), Gaps = 4/84 (4%)
Frame = +3
Query: 510 PXPPXVIXASXPPXRXGPPXXRXXPXSXXIP----GAXRPXPXPXPVXXXSXXXPPXXMX 677
P P + A PP P P P P P P P + P
Sbjct: 71 PYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQ 130
Query: 678 XPXPXXXXPRFPXSXPXPXSXPXA 749
P P P +P P P A
Sbjct: 131 QPPPPPPPPHYPPPPPHYPPPPPA 154
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 543 PPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSX 722
PP PP + P PG P P P PP M P P P
Sbjct: 701 PPTSVQPPQPQQPPQGP--PGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGY 758
Query: 723 PXPXSXPXA 749
P P + P A
Sbjct: 759 P-PGAPPPA 766
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +3
Query: 510 PXPPXVIXASXPPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXP 689
P PP PP R PP R P + P P P P PP + P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPP--RRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +3
Query: 510 PXPPXVIXASXPPXRXG--PPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXP 683
P P + PP G PP P P P P P S PP P
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP---PSRFGPPGMGGMP 334
Query: 684 XPXXXXPRFPXSXPXP 731
P R+P P P
Sbjct: 335 PPPPPGMRYPGGMPPP 350
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 543 PPXRXGPPXXRXXPXSXXIPG---AXRPXPXPXPVXXXSXXXPPXXMXXPXP 689
PP R G P P + PG A P P P P PP P P
Sbjct: 118 PPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGP 169
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 558 GPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSXPXPXS 737
GPP P P P P P P PP M P P P P P P
Sbjct: 26 GPPPCPPPPPPMCAPP---PLPCPPPPICPPQFCPPPPMCPPPPPPPPP--PMCPPPPPP 80
Query: 738 XP 743
P
Sbjct: 81 MP 82
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 516 PPXVIXASXPPXRXG-PPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPX 692
PP PP G PP P PG P P P P PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 791
Query: 693 XXXPRFP 713
P P
Sbjct: 792 MFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 516 PPXVIXASXPPXRXG-PPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPX 692
PP PP G PP P PG P P P P PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 791
Query: 693 XXXPRFP 713
P P
Sbjct: 792 MFAPMAP 798
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +3
Query: 510 PXPPXVIXASXPPXRXG--PPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXP 683
P P + PP G PP P P P P P S PP P
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP---PSRFGPPGMGGMP 344
Query: 684 XPXXXXPRFPXSXPXP 731
P R+P P P
Sbjct: 345 PPPPPGMRYPGGMPPP 360
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 516 PPXVIXASXPPXRXG-PPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPX 692
PP PP G PP P PG P P P P PP P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 374
Query: 693 XXXPRFP 713
P P
Sbjct: 375 MFAPMAP 381
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +3
Query: 507 NPXPPXVIXASXPPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPP 665
NP PP + P PP + GA P P P PV + PP
Sbjct: 502 NPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTP-PPPPPVGMANGGPPP 553
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 612 RPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSXPXPXSXP 743
+P P P P+ P M P P P P P S P
Sbjct: 119 KPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKP 162
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +3
Query: 543 PPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSX 722
PP GPP P P P P PP + P P P S
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF----SVPPSV 138
Query: 723 PXPXSXPXAXXAXXXPSXQXSSP 791
P P S A P + P
Sbjct: 139 PPPTSSAAAPIVPPPPVQSTAQP 161
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +3
Query: 543 PPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSX 722
PP GPP P P P P PP + P P P S
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF----SVPPSV 161
Query: 723 PXPXSXPXAXXAXXXPSXQXSSP 791
P P S A P + P
Sbjct: 162 PPPTSSAAAPIVPPPPVQSTAQP 184
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +3
Query: 543 PPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPXPXXXXPRFPXSX 722
PP GPP P P P P PP + P P P S
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF----SVPPSV 411
Query: 723 PXPXSXPXAXXAXXXPSXQXSSP 791
P P S A P + P
Sbjct: 412 PPPTSSAAAPIVPPPPVQSTAQP 434
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Frame = +3
Query: 507 NPXPPXVIXASXPPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPX 686
+P PP PP PP R P P P PP P
Sbjct: 271 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 687 PXXXXPR-FPXSXPXPXSXP 743
P R P P S P
Sbjct: 331 PPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Frame = +3
Query: 507 NPXPPXVIXASXPPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPX 686
+P PP PP PP R P P P PP P
Sbjct: 292 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 687 PXXXXPR-FPXSXPXPXSXP 743
P R P P S P
Sbjct: 352 PPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Frame = +3
Query: 507 NPXPPXVIXASXPPXRXGPPXXRXXPXSXXIPGAXRPXPXPXPVXXXSXXXPPXXMXXPX 686
+P PP PP PP R P P P PP P
Sbjct: 277 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 687 PXXXXPR-FPXSXPXPXSXP 743
P R P P S P
Sbjct: 337 PPPRQKRQAPERSPPTGSPP 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,189,240
Number of Sequences: 27780
Number of extensions: 124073
Number of successful extensions: 568
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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