Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_E13
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.003
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 40 0.003
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 38 0.011
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 38 0.011
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 38 0.011
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.018
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.018
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.018
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.032
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.23
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.53
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 0.70
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 2.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 6.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 6.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 6.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.6
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 8.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.6
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/115 (26%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Frame = -1
Query: 767 GXXRXG--GGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLG 594
G R G GG G GG R G G G G + G G G
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPG---GGGQGGYGGGNYGGGWGQQG 227
Query: 593 MPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
GWG + G G GW +Q WGG G G G G
Sbjct: 228 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGG 282
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/115 (26%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Frame = -1
Query: 767 GXXRXG--GGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLG 594
G R G GG G GG R G G G G + G G G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPG---GGGQGGYGGGNYGGGWGQQG 265
Query: 593 MPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
GWG + G G GW +Q WGG G G G G
Sbjct: 266 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGG 320
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/100 (32%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Frame = +2
Query: 404 QXGXLXSXXXPPAXSXPPLAXX---PTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXP 574
Q G PPA S PP P L P P PP P S P
Sbjct: 222 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Query: 575 XPXXXASPGXPXPXAXXLPPRPXSPXRSXPXAXLXXPXXG 694
P SP P P A PP P P S P L P G
Sbjct: 282 PPPAGGSP--PPPRAGS-PPPPPPPRGSPPTGSLPPPQAG 318
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 1/121 (0%)
Frame = +1
Query: 391 PXXPSXXXSXLXXPSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXPXXAXLXLX 570
P P S S P P PA P S P S P P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 571 PXPXXXGIPRXXXP-XRXPXXPASXLXPAXSXPCPXXRPRLWRXSXXXRXPPXXPXXWXP 747
P P PR P P A P P PR R + P P P
Sbjct: 298 PPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 748 P 750
P
Sbjct: 355 P 355
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/100 (32%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Frame = +2
Query: 404 QXGXLXSXXXPPAXSXPPLAXX---PTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXP 574
Q G PPA S PP P L P P PP P S P
Sbjct: 243 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Query: 575 XPXXXASPGXPXPXAXXLPPRPXSPXRSXPXAXLXXPXXG 694
P SP P P A PP P P S P L P G
Sbjct: 303 PPPAGGSP--PPPRAGS-PPPPPPPRGSPPTGSLPPPQAG 339
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 1/121 (0%)
Frame = +1
Query: 391 PXXPSXXXSXLXXPSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXPXXAXLXLX 570
P P S S P P PA P S P S P P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 571 PXPXXXGIPRXXXP-XRXPXXPASXLXPAXSXPCPXXRPRLWRXSXXXRXPPXXPXXWXP 747
P P PR P P A P P PR R + P P P
Sbjct: 319 PPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 748 P 750
P
Sbjct: 376 P 376
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/100 (32%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Frame = +2
Query: 404 QXGXLXSXXXPPAXSXPPLAXX---PTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXP 574
Q G PPA S PP P L P P PP P S P
Sbjct: 228 QNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Query: 575 XPXXXASPGXPXPXAXXLPPRPXSPXRSXPXAXLXXPXXG 694
P SP P P A PP P P S P L P G
Sbjct: 288 PPPAGGSP--PPPRAGS-PPPPPPPRGSPPTGSLPPPQAG 324
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 1/121 (0%)
Frame = +1
Query: 391 PXXPSXXXSXLXXPSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXPXXAXLXLX 570
P P S S P P PA P S P S P P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 571 PXPXXXGIPRXXXP-XRXPXXPASXLXPAXSXPCPXXRPRLWRXSXXXRXPPXXPXXWXP 747
P P PR P P A P P PR R + P P P
Sbjct: 304 PPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 748 P 750
P
Sbjct: 361 P 361
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Frame = -1
Query: 767 GXXRXG--GGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLG 594
G R G GG G GG R G G G G G G G G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGY--GGDYG--GGWGQQG 264
Query: 593 MPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
GWG + G G GW +Q WGG G G G G
Sbjct: 265 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGG 319
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Frame = -1
Query: 767 GXXRXG--GGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLG 594
G R G GG G GG R G G G G G G G G
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGY--GGDYG--GGWGQQG 226
Query: 593 MPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
GWG + G G GW +Q WGG G G G G
Sbjct: 227 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGG 281
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Frame = -1
Query: 767 GXXRXG--GGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLG 594
G R G GG G GG R G G G G G G G G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGY--GGDYG--GGWGQQG 264
Query: 593 MPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
GWG + G G GW +Q WGG G G G G
Sbjct: 265 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGG 319
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 422 SXXXPPAXSXPPLAXXPTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXPXPXXXASPG 601
S PP PP P L GP P P PP P P P
Sbjct: 703 SSALPPITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 602 XPXPXAXXLPPRPXSPXRSXPXAXLXXPXXGXF 700
P P PP P P P G F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 422 SXXXPPAXSXPPLAXXPTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXPXPXXXASPG 601
S PP PP P L GP P P PP P P P
Sbjct: 703 SSALPPITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 602 XPXPXAXXLPPRPXSPXRSXPXAXLXXPXXGXF 700
P P PP P P P G F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 422 SXXXPPAXSXPPLAXXPTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXSXPXPXXXASPG 601
S PP PP P L GP P P PP P P P
Sbjct: 286 SSALPPITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 602 XPXPXAXXLPPRPXSPXRSXPXAXLXXPXXGXF 700
P P PP P P P G F
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/69 (27%), Positives = 22/69 (31%)
Frame = -1
Query: 596 GMPXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXGXXX* 417
G P WG R G G + GW G + WGG G G G G
Sbjct: 27 GGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRG 86
Query: 416 EXXXEGXXG 390
+ G G
Sbjct: 87 DWGGNGGGG 95
Score = 34.7 bits (76), Expect = 0.075
Identities = 33/113 (29%), Positives = 34/113 (30%)
Frame = -1
Query: 767 GXXRXGGGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLGMP 588
G R GGG G GG RG G G D G G G G G
Sbjct: 36 GGNRWGGG----GGPGGWGNNGGGGWGRGGGRGGG-DWGGNNGGGGNWGGNGG----GRG 86
Query: 587 XXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
G G R GG + G G WGG G G G G G
Sbjct: 87 DWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGG 139
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = +1
Query: 523 PXPPWXXPXXAXLXLXPXPXXXGIPRXXXPXRXPXXPASXLXPAXSXPCPXXRPRLWRXS 702
P PP A P P +PR P P P + P P RP S
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR-----RPPMTPPSPQRRPPRTPPS 177
Query: 703 XXXRXPPXXPXXWXPPP 753
R PP P PPP
Sbjct: 178 PEPRNPPRTPPSPIPPP 194
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +2
Query: 452 PPLAXXPTLGXXVXGPXXXXXPXXRXPXGXXPPXP-XXXSXPXPXXXASPGXPXPXAXXL 628
PPLA P V P P P PP P + P P P P
Sbjct: 82 PPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHY 141
Query: 629 PPRP 640
PP P
Sbjct: 142 PPPP 145
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 366 PAXPXXPXPTLALXXXLSXXXSXPXPXPXPRXPPXP 473
PA P P P A+ P P P P PP P
Sbjct: 110 PAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPP 145
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.70
Identities = 21/84 (25%), Positives = 21/84 (25%), Gaps = 1/84 (1%)
Frame = +1
Query: 436 PXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXPXXAXLXLXPXPXXXGIPRXXXPX 615
P P P PA P P P PP P P P P P
Sbjct: 349 PEPAPTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTPAPEEAPEAQIPA 408
Query: 616 RXPXXPASXLXP-AXSXPCPXXRP 684
P P A P P P
Sbjct: 409 ETAQIPPENAVPEAPEEPAPTTTP 432
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 436 PXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPP 534
P PAP PP C GP P P PP
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPP 114
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 430 PSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXP 531
P+P P PAPA P + P P +P P
Sbjct: 499 PAPEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVP 532
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +1
Query: 430 PSPXPLPAPAXXP-PHXRXXCSGPXXXPXSXSPXPPWXXPXXAXLXLXPXPXXXGIPRXX 606
P P P PAPA P P C P + P P P P IP
Sbjct: 50 PPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPY---IPEPV 106
Query: 607 XPXRXPXXPASXLXPAXSXPCPXXRP 684
P P P + PCP P
Sbjct: 107 APVPAP-APVYEPYACAAPPCPPPTP 131
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 494 GPXXXXXPXXRXPXGXXPPXPXXXS--XPXPXXXASPGXPXPXAXXLPPRPXSP 649
GP P G PP P P P A P P P + P+P P
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +2
Query: 434 PPAXSXPPLAXXPTLGXXVXGPXXXXX-PXXRXPXGXXPPXP-XXXSXPXPXXXASPGXP 607
PP+ PP P + P P P G PP P P P P
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 608 XPXAXXLPPRPXSP 649
P PP P P
Sbjct: 107 PPPMFGAPPPPPPP 120
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +2
Query: 536 GXXPPXPXXXSXPXPXXXASPGXPXPXAXXLP--PRPXSPXRSXP 664
G PP P P P PG P P P P P P + P
Sbjct: 924 GFIPPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGP 968
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/57 (26%), Positives = 17/57 (29%)
Frame = +2
Query: 494 GPXXXXXPXXRXPXGXXPPXPXXXSXPXPXXXASPGXPXPXAXXLPPRPXSPXRSXP 664
GP P P P P + P P P P + P P P S P
Sbjct: 951 GPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVKPSPSGP 1007
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 435 PXPXPXPRXPPXPXSXXLFXAXXPXXIPIXXPPXXXXXPGP 557
P P P P PP P F P P PP P P
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Frame = -1
Query: 581 WGWGXXXRXAXX-----GXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
WGWG G GG G GW G R GG G G G G G
Sbjct: 20 WGWGPPSPWGFRPSPFFGGRSGGWGRP--GWGGGGPGWGRGGGGSGWGGGRGGGWG 73
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 639 GRGGXWXAXGXGXPGDAXXXGXGXEX*XGXGGXXPXGXRXXGXXXXXGPXTXXPXVGXXA 460
GRGG G G G G G GG G R G G G
Sbjct: 56 GRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Query: 459 SGGXEXAGG 433
GG GG
Sbjct: 116 GGGGGRGGG 124
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1
Query: 430 PSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXP 546
PSP P PAPA PP R P P +P PP P
Sbjct: 763 PSPVPRPAPA--PPGGRQAPMPPRGGP--GAPPPPGMRP 797
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1
Query: 430 PSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXP 546
PSP P PAPA PP R P P +P PP P
Sbjct: 763 PSPVPRPAPA--PPGGRQAPMPPRGGP--GAPPPPGMRP 797
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1
Query: 430 PSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXP 546
PSP P PAPA PP R P P +P PP P
Sbjct: 763 PSPVPRPAPA--PPGGRQAPMPPRGGP--GAPPPPGMRP 797
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1
Query: 430 PSPXPLPAPAXXPPHXRXXCSGPXXXPXSXSPXPPWXXP 546
PSP P PAPA PP R P P +P PP P
Sbjct: 763 PSPVPRPAPA--PPGGRQAPMPPRGGP--GAPPPPGMRP 797
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 29/112 (25%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Frame = -1
Query: 767 GXXRXGGGXQXSGXXGGXRXXXEXRXXRGRXXGXGXDXAGXRXDAGXXGLRXGXXLLGMP 588
G + G G Q G GG + GR G + G G G G G
Sbjct: 176 GGSQGGWGGQNGGGQGGNQGGGG-----GRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWG 230
Query: 587 XXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWG-GXXAGAGXGXG 435
G R G G G GW G WG G + G G G
Sbjct: 231 NQGGQQGGGRGGQQGPGGWGGGGRGGGW--GGWGRGSRWGWGRPSWGGWGRG 280
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/90 (24%), Positives = 25/90 (27%), Gaps = 3/90 (3%)
Frame = +1
Query: 508 PXSXSPXPPWXXPXXAXLXLXPXPXXXGI---PRXXXPXRXPXXPASXLXPAXSXPCPXX 678
P S +P PP P P P G+ P P R P P P P
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 679 RPRLWRXSXXXRXPPXXPXXWXPPPSLXXP 768
P + P PPP P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -1
Query: 590 PXXWGWGXXXRXAXXGXXXGGXGDXDXGWXXGPEQXXRXWGGXXAGAGXGXGXG 429
P GWG G G G+ GW WGG G G G G
Sbjct: 677 PPRGGWGRDD----FGDNGGWGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGG 726
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Frame = +2
Query: 389 PHXXPQXGXLXSXXXPPAXSXPPLAXXPTLGXXVXGPXXXXXPXXRXPXGXXPPXPXXXS 568
P P G + P P P+ G GP P G P P S
Sbjct: 145 PSGPPSPGPVDPSEDPQPSVEPSEDPQPS-GPPSPGPVDPSEDPQ--PSGSSSPGPVDPS 201
Query: 569 X-PXPXXXASPGXPXPXAXXLPPRPXSPXRSXP 664
P P SPG P P P SP P
Sbjct: 202 DEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDP 234
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/90 (24%), Positives = 25/90 (27%), Gaps = 3/90 (3%)
Frame = +1
Query: 508 PXSXSPXPPWXXPXXAXLXLXPXPXXXGI---PRXXXPXRXPXXPASXLXPAXSXPCPXX 678
P S +P PP P P P G+ P P R P P P P
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 679 RPRLWRXSXXXRXPPXXPXXWXPPPSLXXP 768
P + P PPP P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,647,721
Number of Sequences: 27780
Number of extensions: 145316
Number of successful extensions: 867
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -