Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_E11
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1169 + 24501594-24502826                                         29   5.5  
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696...    29   5.5  
08_01_0059 - 394001-394708                                             28   9.6  

>07_03_1169 + 24501594-24502826
          Length = 410

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 523 GGPTXQXXXTXNPXPPWRXPXPAA 594
           GGP      +  P PPW  P PAA
Sbjct: 60  GGPWKVYALSRRPPPPWSPPPPAA 83


>01_06_0357 -
           28668894-28669238,28669510-28669537,28669578-28669635,
           28669836-28669916,28670395-28670526,28670609-28670926,
           28672495-28673317
          Length = 594

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +1

Query: 367 PPXXXTPPXTPPXXPARXKPXXRCPXRPXXSTPTSXXL 480
           PP    PP  PP  P       R P  P  S P S  L
Sbjct: 2   PPPPPPPPPPPPSPPRLPLTAHRLPLPPATSPPASLLL 39


>08_01_0059 - 394001-394708
          Length = 235

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 367 PPXXXTPPXTPPXXPARXKPXXRCPXRP 450
           P     PP TPP  P R  P    P RP
Sbjct: 7   PRRAPPPPATPPPPPRRAPPPPSPPIRP 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,254,762
Number of Sequences: 37544
Number of extensions: 140486
Number of successful extensions: 739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)