Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_E08
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0767 + 31823659-31823734,31823859-31823979,31824078-318241... 31 1.2
11_04_0443 - 17808897-17809110,17809169-17813652 30 1.6
11_01_0250 + 1924261-1924848 29 2.9
07_01_0608 + 4515709-4515951,4516085-4516678 29 5.0
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 29 5.0
06_03_0460 + 21024729-21025102,21025599-21025917 28 6.6
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672... 28 6.6
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 8.7
03_04_0153 + 17745473-17745889,17746120-17746272,17747307-177475... 28 8.7
02_02_0326 - 8976913-8976963,8977453-8977521,8978247-8978438,897... 28 8.7
>01_06_0767 +
31823659-31823734,31823859-31823979,31824078-31824189,
31824278-31824691,31824795-31824898,31825017-31825136,
31825344-31825467,31826567-31826680,31826789-31826980,
31827328-31827424,31827505-31827653,31828729-31829013
Length = 635
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 496 VRNPPSLLRCVFSSVVLWSLLGFVXVIFLLADTSAXSTMFSGSSWNQ 636
+ +PP LL +F ++LG VIF+L D S F + N+
Sbjct: 135 LESPPELLELIFEEATKSNILGLPSVIFVLHDLIVVSLQFDMNVTNR 181
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 614 NIVDXADVSASRKITXTNPRSDQRTTELKTQRSKDGGF--RTAPDGRL 477
NIV A S ++ TNP D++ T L G F ++ PDGRL
Sbjct: 576 NIVVPAKGSKWVRLMGTNPWKDEKYTVLAADYMSSGSFARKSTPDGRL 623
>11_01_0250 + 1924261-1924848
Length = 195
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 580 GKSLXRTRGATRERLS*RRSGVKTAGSGRPRTADSSSATRPS---MMTTTNRSPAATLTR 410
G S + ++++R RRSG K+ G ++ SSS S TT RS
Sbjct: 9 GSSSSSSSSSSKKRRKKRRSGAKSCSFGSTTSSSSSSLAASSSDDSAATTPRSVLPASAA 68
Query: 409 TPMTQTTKPKAASL 368
+ T KP A ++
Sbjct: 69 ASSSGTKKPAAVAV 82
>07_01_0608 + 4515709-4515951,4516085-4516678
Length = 278
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -2
Query: 541 RLS*RRSGVKTAGSGRPRTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 383
+LS R A +P+ A AT+P + TT PAA T+ KP
Sbjct: 142 KLSSTRPAAPAAADAKPKAAP---ATKPKVKTTKAAKPAAKAKAPATTKAAKP 191
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -2
Query: 523 SGVKTAGSGRPRTADSSSA----TRPSMMTTTNRSPAATLTRTPMTQTTK 386
S AG GRP T SSSA T PS + +P++ TP + +++
Sbjct: 51 SSSSAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSSGRPTTPSSASSR 100
>06_03_0460 + 21024729-21025102,21025599-21025917
Length = 230
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 556 GATRERLS*RRSGVKTAGSGRPRTADSSSATRPSMMTTTNRSPAAT 419
G R R + GV A G A S ++ S TTT RSPA++
Sbjct: 3 GIARRRGGGDQGGVAAAAGGDGEAAASGFSSGDSSATTTLRSPASS 48
>02_05_0969 + 33165396-33165935,33166352-33166883,33166988-33167242,
33167515-33167606,33167745-33167942,33168049-33168240,
33168341-33168562,33168858-33169024,33169117-33169210,
33169308-33169364,33169459-33169587,33169681-33169752,
33170180-33170293,33170419-33170580,33170666-33170794,
33171057-33171158,33171266-33171342,33171470-33171592,
33171666-33172227
Length = 1272
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 245 KGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKR 90
+ + R +++ A T G DY K DPYAY PL R LN+R
Sbjct: 1176 QSVKRRKTTSSGWAYT-GHDYTSKKASGDLKKKDKMDPYAYWPLDRKLLNRR 1226
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 553 ATRERLS*RRSGVKTAGSGRPRT-ADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKA 377
A R R RRS VKT S R R+ + + R S + + RSP + Q PK
Sbjct: 251 APRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVK---EQVRSPKQ 307
Query: 376 ASLRS 362
A RS
Sbjct: 308 AQSRS 312
>03_04_0153 +
17745473-17745889,17746120-17746272,17747307-17747512,
17747752-17747959
Length = 327
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 242 PSLRSCTWSRRLQWRP 289
P LR C W+ R +WRP
Sbjct: 22 PQLRLCNWAPRPRWRP 37
>02_02_0326 -
8976913-8976963,8977453-8977521,8978247-8978438,
8978597-8978764,8978902-8979513,8979765-8979815
Length = 380
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 350 RPSEASKACRLGFRCLCHRCP 412
RP A A R+G RCL CP
Sbjct: 13 RPDRAVDAMRVGLRCLMSTCP 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,873,812
Number of Sequences: 37544
Number of extensions: 265901
Number of successful extensions: 1125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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