Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_E08
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.18 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   9.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 183  QTEESQGRYQEEGQARSLRLPTPVQDKSQQKEKICQQQ 70
            Q ++ Q + Q++ Q    + P P Q + QQ+++  QQQ
Sbjct: 1509 QQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546



 Score = 24.6 bits (51), Expect = 0.97
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 496 RPRTADSSSATRPSMMTTTNRSPAATLTRTPMTQTT 389
           RP    +SS + P+ +TTT  +   T      T TT
Sbjct: 92  RPLHPPASSTSLPATITTTTTTTTTTTATAAATATT 127



 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 496  RPRTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAASLRSF*RP 350
            RPR  D   +   +  T+T  + AA     P T   KP+    + F  P
Sbjct: 1087 RPRKRDQKQSDDKTKETSTVTAAAAATNIRPGTADNKPQLKPQKPFTSP 1135



 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 156  QEEGQARSLRLPTPVQDKSQQKEKICQQQTVQR 58
            Q+E + R      P Q + QQ+++  QQQ  Q+
Sbjct: 1434 QQEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQQ 1466


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 377 GKPSKLLKAGTKRRYDDIL 321
           GKPS++ K G  RR+ ++L
Sbjct: 542 GKPSRISKQGLFRRFYNLL 560


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -2

Query: 478 SSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAASLRSF*RPERN 341
           SS  +     +    +    L + P+TQ+ K  A +L +   P RN
Sbjct: 311 SSDLSESETSSDEEEADTRPLKKEPITQSNKRTAGNLATREHPSRN 356


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 165 GRYQEEGQARSLRLPTPVQDKSQQKEKICQQQTVQRDSE 49
           G  QE+ Q +  +  T  Q + Q   K  QQQ  Q+D +
Sbjct: 229 GYIQEQNQQQQQQPLTQQQYQQQIVGKYLQQQAGQQDQQ 267


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = -1

Query: 344 KRRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVASTLGGDY 183
           ++R  D   + SG  +  RA     G + K    GI+ +  S         G Y
Sbjct: 236 EKRSTDFQDVESGSESFKRARMGFHGMRGKRDAAGIYGSNSSTVGTIFGYQGTY 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,394
Number of Sequences: 438
Number of extensions: 2456
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)