Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_E06
(1054 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.20
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.20
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.34
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.34
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.34
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.34
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 0.61
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 0.97
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.2
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 7.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 9.7
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 28 9.7
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 762 GGXGXXXGGGXXXXGXXXRPP----GXEXRXFFXXXGGGGXXPPPPPXGG 625
GG G GGG G PP G GGGG PPP P GG
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81
Score = 29.9 bits (64), Expect = 3.2
Identities = 36/136 (26%), Positives = 36/136 (26%)
Frame = -3
Query: 956 GXGGXXXGXGGGXLVXGXXLXXXXXXGXXVGVGIGGGXXXWRSLXXGXGXXXXXXGVXGX 777
G GG G GGG G G G G GGG S G G G G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG-GGG 160
Query: 776 AXXXRGXXGGXXGXXXGAXXXXXAXRXXRXGXFFXXXGGXXXNPPPPRXGGXNXPXGXXX 597
G GG G G A GG P GG G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG----CGGGG 216
Query: 596 SXXXXGXXXPPKXXGG 549
S G P GG
Sbjct: 217 SSGGGGYASAPSGGGG 232
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 762 GGXGXXXGGGXXXXGXXXRPP----GXEXRXFFXXXGGGGXXPPPPPXGG 625
GG G GGG G PP G GGGG PPP P GG
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81
Score = 29.9 bits (64), Expect = 3.2
Identities = 36/136 (26%), Positives = 36/136 (26%)
Frame = -3
Query: 956 GXGGXXXGXGGGXLVXGXXLXXXXXXGXXVGVGIGGGXXXWRSLXXGXGXXXXXXGVXGX 777
G GG G GGG G G G G GGG S G G G G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG-GGG 160
Query: 776 AXXXRGXXGGXXGXXXGAXXXXXAXRXXRXGXFFXXXGGXXXNPPPPRXGGXNXPXGXXX 597
G GG G G A GG P GG G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG----CGGGG 216
Query: 596 SXXXXGXXXPPKXXGG 549
S G P GG
Sbjct: 217 SSGGGGYASAPSGGGG 232
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Frame = +2
Query: 626 PPXGGGGG--XXPPPPXXXKNXRXSXP--GG---RXXXPXXXXPPPXXXPXPPS 766
PP GG G PPPP + + P GG R P PPP P PPS
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPPS 1614
Score = 25.8 bits (54), Expect(2) = 2.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 738 PXXPXPXPPPXPRXXXNTXPPXPXTXXP 821
P P P PPP P T P P P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 23.0 bits (47), Expect(2) = 2.0
Identities = 13/48 (27%), Positives = 14/48 (29%)
Frame = +3
Query: 906 PPX*PPPPXXXXXPXXPXXLXKXXPPXXQXXXXLXPXSXXXXSXQXXN 1049
PP PPPP P PP L P S + N
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKN 1403
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.1 bits (72), Expect = 0.34
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPPS 766
PP G G PPPP + G P PPP P PPS
Sbjct: 542 PPVGMANGGPPPPPPLPLDLLKGAVAGLKSVP--GGPPPPPPPPPPS 586
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 650 NPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXTP 471
+PPPPR G P G PP G P G PPP P
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Query: 470 PXXPG 456
P G
Sbjct: 323 PAGTG 327
Score = 31.9 bits (69), Expect = 0.79
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPK-KXXTVXXGGXPPPPXX 486
G PPPP+ G G PP+ P GG PPPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 485 XFXTPPXXPGPXXRXXXXPKXXXGG 411
PP P P GG
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPP 763
PP G G PPPP + G P PPP PP
Sbjct: 247 PPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = -3
Query: 650 NPPPPRXGG-XNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXT 474
+PPPP G P G G PP G GG PPP
Sbjct: 271 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 473 PP 468
PP
Sbjct: 331 PP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 650 NPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXTP 471
+PPPPR G P G PP G P G PPP P
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Query: 470 PXXPG 456
P G
Sbjct: 344 PAGTG 348
Score = 31.9 bits (69), Expect = 0.79
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPK-KXXTVXXGGXPPPPXX 486
G PPPP+ G G PP+ P GG PPPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 485 XFXTPPXXPGPXXRXXXXPKXXXGG 411
PP P P GG
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPP 763
PP G G PPPP + G P PPP PP
Sbjct: 268 PPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = -3
Query: 650 NPPPPRXGG-XNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXT 474
+PPPP G P G G PP G GG PPP
Sbjct: 292 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 473 PP 468
PP
Sbjct: 352 PP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 650 NPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXTP 471
+PPPPR G P G PP G P G PPP P
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Query: 470 PXXPG 456
P G
Sbjct: 329 PAGTG 333
Score = 31.9 bits (69), Expect = 0.79
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPK-KXXTVXXGGXPPPPXX 486
G PPPP+ G G PP+ P GG PPPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 485 XFXTPPXXPGPXXRXXXXPKXXXGG 411
PP P P GG
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPP 763
PP G G PPPP + G P PPP PP
Sbjct: 253 PPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = -3
Query: 650 NPPPPRXGG-XNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXT 474
+PPPP G P G G PP G GG PPP
Sbjct: 277 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 473 PP 468
PP
Sbjct: 337 PP 338
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect(2) = 0.61
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 626 PPXGGGGGXXPPPP 667
PP GG GG PPPP
Sbjct: 425 PPQGGPGGFGPPPP 438
Score = 22.2 bits (45), Expect(2) = 0.61
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 449 PXXXGXPGGXXXTXXGGXGXP 511
P G PGG GG G P
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAP 420
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.6 bits (56), Expect(2) = 0.97
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 747 PXPXPPPXPRXXXNTXPPXP 806
P P PPP P+ PP P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPP 580
Score = 23.4 bits (48), Expect(2) = 0.97
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 885 PPXXXXXPPX*PPPPXXXXXP 947
PP PP PPPP P
Sbjct: 582 PPPMLGGPPPPPPPPGGLMGP 602
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = -3
Query: 662 GXXXNPP--PPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPX 489
G PP PP GG P G PP GG P GG PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPP------ISGGPPPPPP 763
Query: 488 XXFXTPPXXPGP 453
PP P P
Sbjct: 764 PPGGCPPPPPPP 775
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Frame = +2
Query: 626 PPXGG----GGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPPSXSXXXXXHL 793
PP GG GG PPPP P P PPP P PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGGPPP 786
Query: 794 PXXPXXXXPXXNSSTXXIPXQSQPQRXXP 880
P P P +P + P+ P
Sbjct: 787 PPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = -3
Query: 662 GXXXNPP--PPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPX 489
G PP PP GG P G PP GG P GG PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPP------ISGGPPPPPP 763
Query: 488 XXFXTPPXXPGP 453
PP P P
Sbjct: 764 PPGGCPPPPPPP 775
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Frame = +2
Query: 626 PPXGG----GGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPPSXSXXXXXHL 793
PP GG GG PPPP P P PPP P PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGGPPP 786
Query: 794 PXXPXXXXPXXNSSTXXIPXQSQPQRXXP 880
P P P +P + P+ P
Sbjct: 787 PPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = -3
Query: 662 GXXXNPP--PPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPX 489
G PP PP GG P G PP GG P GG PPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPP------ISGGPPPPPP 346
Query: 488 XXFXTPPXXPGP 453
PP P P
Sbjct: 347 PPGGCPPPPPPP 358
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Frame = +2
Query: 626 PPXGG----GGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXPXPPSXSXXXXXHL 793
PP GG GG PPPP P P PPP P PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGGPPP 369
Query: 794 PXXPXXXXPXXNSSTXXIPXQSQPQRXXP 880
P P P +P + P+ P
Sbjct: 370 PPPPGMFAPMAPVIPDYLPPKKVPKVDGP 398
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPP--XXXPXPPSXSXXXXXHLPX 799
PP G PPPP PG P PP P PP +P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Query: 800 XPXXXXPXXNSSTXXIPXQSQP 865
P P P S+P
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRP 371
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXX-PPKXXGGXFXPKKXXTVXXGGXPPPPXX 486
G PPPP G P G P GG P GG PPPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 485 XFXTPPXXPG 456
+ P PG
Sbjct: 354 RY--PSAGPG 361
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXX 483
G PPPP G P G P P + GG PPPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPPPPG 340
Query: 482 FXTPPXXPGP 453
P P P
Sbjct: 341 MRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = +2
Query: 626 PPXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPP--XXXPXPPSXSXXXXXHLPX 799
PP G PPPP PG P PP P PP +P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Query: 800 XPXXXXPXXNSSTXXIPXQSQP 865
P P P S+P
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRP 381
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXX-PPKXXGGXFXPKKXXTVXXGGXPPPPXX 486
G PPPP G P G P GG P GG PPPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 485 XFXTPPXXPG 456
+ P PG
Sbjct: 364 RY--PSAGPG 371
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -3
Query: 662 GXXXNPPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXX 483
G PPPP G P G P P + GG PPPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPPPPG 350
Query: 482 FXTPPXXPGP 453
P P P
Sbjct: 351 MRYPGGMPPP 360
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 795 GRCXXXXXEXEGGXGXXXGGGXXXXGXXXRPPGXEXRXFFXXXGGGGXXPPPPPXGG 625
G C GG G GGG G G GGG PPPPP G
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACG 119
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 762 GGXGXXXGGGXXXXGXXXRPPGXEXRXFFXXXGGGGXXPPPPPXGG 625
GG G GGG G G GG PPPP GG
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 28.3 bits (60), Expect = 9.7
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -3
Query: 956 GXGGXXXGXGGGXLVXGXXLXXXXXXGXXVGVGIGGGXXXWRSLXXGXGXXXXXXGVXGX 777
G GG G GGG G G G GGG G G G G
Sbjct: 91 GCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCG-GGGGGCGGGCGGGGGGGCGGGGGGGC 149
Query: 776 AXXXRGXXGGXXGXXXG 726
G GG G G
Sbjct: 150 GGGGGGCGGGGGGCGGG 166
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = -3
Query: 647 PPPPRXGGXNXPXGXXXSXXXXGXXXPPKXXGGXFXPKKXXTVXXGGXPPPPXXXFXTPP 468
PPP G P G G PP G P GG PPPP F PP
Sbjct: 66 PPPVPNGFIPPPPGPG------GIPPPPPMFAGGIPPPPPMM---GGIPPPP-PMFGAPP 115
Query: 467 XXPGP 453
P P
Sbjct: 116 PPPPP 120
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +3
Query: 747 PXPXPPPXPRXXXNTXPPXPXTXXPXQXXXXXXXXXXXXXXVXXXXPPXXXXXPPX*PPP 926
P P PPP + PP P P PP PP PP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPP----PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
Query: 927 PXXXXXPXXPXXLXKXXPP 983
P P P PP
Sbjct: 178 PEPRNPPRTPPSPIPPPPP 196
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.2
Identities = 33/145 (22%), Positives = 34/145 (23%)
Frame = -3
Query: 983 WGXXFXXXXGXGGXXXGXGGGXLVXGXXLXXXXXXGXXVGVGIGGGXXXWRSLXXGXGXX 804
WG G GG G GGG G G G G GG G G
Sbjct: 25 WGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGG 84
Query: 803 XXXXGVXGXAXXXRGXXGGXXGXXXGAXXXXXAXRXXRXGXFFXXXGGXXXNPPPPRXGG 624
G G G G G G G GG R G
Sbjct: 85 RGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGD 144
Query: 623 XNXPXGXXXSXXXXGXXXPPKXXGG 549
P G G + GG
Sbjct: 145 GRGPPGSNGGGDWGGNGGGGRGGGG 169
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 629 PXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXP 754
P GGG G PPPP + P G+ P PP P
Sbjct: 673 PPGGGQGP-PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRP 713
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 629 PXGGGGGXXPPPPXXXKNXRXSXPGGRXXXPXXXXPPPXXXP 754
P GGG G PPPP + P G+ P PP P
Sbjct: 673 PPGGGQGP-PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRP 713
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 626 PPXGGGGGXXPPPP 667
P GGGGG PPPP
Sbjct: 157 PTGGGGGGSVPPPP 170
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +3
Query: 747 PXPXPPPXPRXXXNTXPPXPXTXXPXQXXXXXXXXXXXXXXVXXXXPPXXXXXPPX*PPP 926
P P PPP P P P P PP PP PPP
Sbjct: 93 PVPAPPPAPYPQHAVPAPAPPPA-PYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPP 151
Query: 927 P 929
P
Sbjct: 152 P 152
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 708 RPPGXEXRXFFXXXGGGGXXPPPPPXGGXEXXAXXXXXXXXPGXXXXP 565
RPPG + R GGGG P GG PG P
Sbjct: 572 RPPGGDSRGVDRPPGGGGIPGVDRPPGGGRRGVDRPPGSGMPGIDRPP 619
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/83 (25%), Positives = 25/83 (30%)
Frame = -2
Query: 663 GGGXXPPPPPXGGXEXXAXXXXXXXXPGXXXXPQXXGXXFFXQKXKXRXLXGXPXPPXXV 484
GG P PP G + PG P + G P PP +
Sbjct: 213 GGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQV-----IEVPGTPGPAGPPGPPGPI 267
Query: 483 FXNPPGXPXXXGKGXXXPEXPXG 415
PPG P G P+ P G
Sbjct: 268 --GPPGQPGAPGSSQPGPQGPPG 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,334,933
Number of Sequences: 27780
Number of extensions: 307346
Number of successful extensions: 2103
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2803879784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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