Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D24
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 40 0.002
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 35 0.057
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 32 0.53
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 31 0.70
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 31 1.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 1.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.8
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 3.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 4.9
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 6.5
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 6.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.6
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 8.6
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 8.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.6
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 28 8.6
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 8.6
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 8.6
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 8.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.6
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 28 8.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 8.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 8.6
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/114 (28%), Positives = 37/114 (32%), Gaps = 3/114 (2%)
Frame = +1
Query: 391 APXPXALXAXXPRXXXGPXXPVXPXPSXFXXXPVRXGPRGXFXSXXPRAXGPGPXXGXXG 570
AP P A P+ GP PV P F P + GP G F + P A G G G
Sbjct: 350 APPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPP-QSGPPGAF-APPPSAFGAPQGPGGPG 407
Query: 571 GXXXVGXXXXXXPPPSFXPXASP---XXRXRGXSPXFXXPXAGXXSLGXXPPXA 723
G P P P G + P G +G PP A
Sbjct: 408 GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGA 461
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG 542
P+ PPP G P G G G G G P P PGG
Sbjct: 382 PQSGPPGAFAPPPS---AFGAPQGPGGPGGYGPPPPGGPG---APGSYGPPQGGPGGFGP 435
Query: 541 PPPG 530
PPPG
Sbjct: 436 PPPG 439
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPP 536
PP G P G G G G G GPP N P PG G+ G P
Sbjct: 212 PPGEPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPGDNGPNGEPGKDGEDGAP 264
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXG--GXTRAGXXXDXGPPRXNXPXXXPGGDXGPPP 533
PP G P G G G + G GPP P PGG GP P
Sbjct: 144 PPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGP 197
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXG--GXTRAGXXXDXGPPRXNXPXXXPGGDXGPPP 533
PP G P G G G + G GPP P PGG GP P
Sbjct: 144 PPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGP 197
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GD 548
P + + PPP G P G G G G GPP P PG G
Sbjct: 124 PPKEPCEPLTPPPCKPCPEGPP---GPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGP 180
Query: 547 XGPP-PG 530
GPP PG
Sbjct: 181 AGPPGPG 187
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 658 PPGX-GXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPPPGXXXXKXXXXXRXGRGX 482
PPG G G+ G AG G P P G + P PG RG
Sbjct: 165 PPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGP 224
Query: 481 XXXRRAXXGPGGR 443
PGG+
Sbjct: 225 AGEPGKDGSPGGQ 237
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.70
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGD-XGPPPGXXXXKX 512
PP G P G G+ G R G GPP P G + G P G K
Sbjct: 188 PPGPPGLKGMPGIPGNQGEDAGPGRQGMPGPTGPPGPRGPPGETGDEGEGGPDGIPMEKK 247
Query: 511 XXXXRXGRGXXXXRRAXXGPGGR 443
G GP GR
Sbjct: 248 SPPGPRGPPGPAGPDGPQGPEGR 270
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP-PPGXXXXKX 512
PP G P G G+ GG G GP PG D P PG
Sbjct: 169 PPGAPGQAGAPGNDGRPGQSGGAAIPGPPGPPGPSGQPGQDGHPGQDGQPGQPGESREVP 228
Query: 511 XXXXRXGRGXXXXRRAXXGPGGR 443
G+ GP GR
Sbjct: 229 GAPGPAGQPGSQGEPGPSGPDGR 251
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Frame = -1
Query: 700 EXGPP--PXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXP--XXXPG--GDXGP 539
E G P P T G P G G G + G D G P + P PG GD GP
Sbjct: 171 EAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGP 230
Query: 538 --PPG 530
PPG
Sbjct: 231 AGPPG 235
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = -1
Query: 733 TXXXPEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG 554
T P + Q PP G P G G+ G G GPP PG
Sbjct: 144 TTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPG 203
Query: 553 --GDXGPP 536
GD G P
Sbjct: 204 PQGDAGTP 211
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 691 PPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
P T G P G G G G + GPP P PG D GP
Sbjct: 211 PAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPD-GP 260
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Frame = -1
Query: 700 EXGPP--PXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXP--XXXPG--GDXGP 539
E G P P T G P G G G + G D G P + P PG GD GP
Sbjct: 171 EAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGP 230
Query: 538 --PPG 530
PPG
Sbjct: 231 AGPPG 235
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = -1
Query: 733 TXXXPEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG 554
T P + Q PP G P G G+ G G GPP PG
Sbjct: 144 TTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPG 203
Query: 553 --GDXGPP 536
GD G P
Sbjct: 204 PQGDAGTP 211
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 691 PPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
P T G P G G G G + GPP P PG D GP
Sbjct: 211 PAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPD-GP 260
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 670 TXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
T G P G G G G + GPP P PG D GPP
Sbjct: 216 TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPD-GPP 259
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/68 (27%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = -1
Query: 733 TXXXPEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG 554
T P + Q PP G P G G+ G G GPP PG
Sbjct: 142 TTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 201
Query: 553 --GDXGPP 536
G+ G P
Sbjct: 202 PAGEPGTP 209
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
PP T G P G G G G + G GP PG GP
Sbjct: 172 PPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGP 221
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -1
Query: 700 EXGP--PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
E GP PP G P G G G G G P P PG GP
Sbjct: 216 EPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGGP 271
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 670 TXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
T G P G G G G + GPP P PG D GPP
Sbjct: 211 TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPD-GPP 254
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/68 (27%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = -1
Query: 733 TXXXPEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG 554
T P + Q PP G P G G+ G G GPP PG
Sbjct: 137 TTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 196
Query: 553 --GDXGPP 536
G+ G P
Sbjct: 197 PAGEPGTP 204
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXP--GGDXGP 539
G PP G PP G G G +G GPP P P GG GP
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFG---PSGAPPSGGPPGPFNPSEAPPSGGPTGP 214
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -1
Query: 703 QEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXP--GGDXGP 539
Q G PP G PP G G +G GPP P P GG GP
Sbjct: 311 QPSGGPPGPFNPSGAPPSGGPPGP---FDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 364
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXP--GGDXGP 539
G PP G PP G G +G GPP P P GG GP
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGP---FNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 454
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXP--GGDXGP 539
G PP G PP G G +G GPP P P GG GP
Sbjct: 449 GGPPGPFNPSGAPPSGGPPGP---FNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 499
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 670 TXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
T G P G G G G + GPP P PG D GPP
Sbjct: 211 TPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPD-GPP 254
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/68 (27%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = -1
Query: 733 TXXXPEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG 554
T P + Q PP G P G G+ G G GPP PG
Sbjct: 137 TTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 196
Query: 553 --GDXGPP 536
G+ G P
Sbjct: 197 PAGEPGTP 204
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 664 GTPPGXGXXGKX--GGXTRAGXXXDXGPPRXNXPXXXPGGDXG-PPPG 530
G P G GK GG +R G GPP PGG G PPG
Sbjct: 236 GAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPG 283
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 11/93 (11%)
Frame = -1
Query: 694 GPP-----PXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGP------PRXNXPXXXPGGD 548
GPP P + G P G G GG + G GP P P PG
Sbjct: 152 GPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHS 211
Query: 547 XGPPPGXXXXKXXXXXRXGRGXXXXRRAXXGPG 449
P PG R RG + PG
Sbjct: 212 DEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPG 244
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/107 (25%), Positives = 32/107 (29%), Gaps = 14/107 (13%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGP---------PRXNXP 569
P + + PPP G P G GK G G GP P + P
Sbjct: 133 PPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGP 192
Query: 568 XXXPG-----GDXGPPPGXXXXKXXXXXRXGRGXXXXRRAXXGPGGR 443
PG G GPP K + GR R G G+
Sbjct: 193 NGHPGKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGK 239
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
PP G P G G+ G G + GPP PG D P
Sbjct: 169 PPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAP 218
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/94 (26%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GD 548
P + + PPP G P G G G G GPP P G G
Sbjct: 122 PPKEPCEPITPPPCKPCPEGPP---GPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGP 178
Query: 547 XGPP-PGXXXXKXXXXXRXGRGXXXXRRAXXGPG 449
GPP PG GR + PG
Sbjct: 179 AGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPG 212
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPPP 533
G PP G+PP G G AG PPR P P G PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPP 284
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPPP 533
G PP G+PP G G AG PPR P P G PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPP 305
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPPP 533
G PP G+PP G G AG PPR P P G PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPPP 290
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
GTP G G+ G G D G P + P PG D P
Sbjct: 764 GTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGPPGLPGQDGLP 805
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
GTP G G+ G G D G P + P PG D P
Sbjct: 1021 GTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGPPGLPGQDGLP 1062
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
GTP G G+ G G D G P + P PG D P
Sbjct: 1020 GTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGPPGLPGQDGLP 1061
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 4/85 (4%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPP--PGXXX 521
PP G P G G G G D GP PG G GPP PG
Sbjct: 205 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYK 264
Query: 520 XKXXXXXRXGRGXXXXRRAXXGPGG 446
+ R G GP G
Sbjct: 265 TEVGPAGRAGAPGRPGPPGQPGPAG 289
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Frame = -1
Query: 700 EXGPP--PXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPP 536
+ GPP P G P G G G R G PP+ PG G GPP
Sbjct: 109 QVGPPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPP 167
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 4/85 (4%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPP--PGXXX 521
PP G P G G G G D GP PG G GPP PG
Sbjct: 186 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYK 245
Query: 520 XKXXXXXRXGRGXXXXRRAXXGPGG 446
+ R G GP G
Sbjct: 246 TEVGPAGRAGAPGRPGPPGQPGPAG 270
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 374 PXXPXKPPXPXPXXRXXPVXXPXPXXRSXPSPP 472
P P PP P R P+ P P R +PP
Sbjct: 144 PRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP-PPG 530
GTP G G G GG G G P PG GP PG
Sbjct: 98 GTPGGPGNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPG 143
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG 542
P+ + P P G P G G G A GPP P PG D
Sbjct: 210 PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA-AGPPGPPGPAGAPGPDGN 268
Query: 541 P----PPG 530
P PPG
Sbjct: 269 PGTAGPPG 276
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGD 548
PP G P G G G G GPP N PG D
Sbjct: 207 PPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQGEPGKD 253
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGD 548
PP G P G G G G GPP N PG D
Sbjct: 207 PPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGDNGGQGEPGKD 253
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG 542
P+ + P P G P G G G A GPP P PG D
Sbjct: 209 PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA-AGPPGPPGPAGAPGPDGN 267
Query: 541 P----PPG 530
P PPG
Sbjct: 268 PGTAGPPG 275
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 356 PLXVSXPXXPXKPPXPXPXXRXXPV-XXPXPXXRSXPSPPXSXXTPS 493
P+ + P P PP P P+ P P P PP PS
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPS 92
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP--PGXXXXK--XXXXXR 497
G P G G+ G AG PP N P G GPP PG + +
Sbjct: 106 GEPGRDGFPGREGDNGIAGKYLPAPPPGTNACQKCPTGAPGPPGLPGPKGPRGPAGIEGK 165
Query: 496 XGRGXXXXRRAXXGPGG 446
GR R GP G
Sbjct: 166 PGRLGEDNRPGPPGPPG 182
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 688 PPXXXXTXGTPPGXGXXGKXGGXTRA-GXXXDXGPPRXNXPXXXPGGDXG 542
PP G P G G G G T G GPP P P G+ G
Sbjct: 209 PPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGP-PGPAGNAG 257
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
G P G G G G D GP P GD GPP
Sbjct: 188 GAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPP 230
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
G P G G G G D GP P GD GPP
Sbjct: 225 GAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPP 267
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 374 PXXPXKPPXPXPXXRXXPVXXPXPXXRSXPSPP 472
P P PP P P P P R P PP
Sbjct: 240 PSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXP-XXXPGG----DXGPPPG 530
GPPP G PP GG G GPP P P G GPPP
Sbjct: 100 GPPPGMP--GGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPL 157
Query: 529 XXXXKXXXXXRXGRGXXXXRRAXXGPGG 446
G G GP G
Sbjct: 158 MGGGGDPRGPPGGMGGPPGHGGMGGPPG 185
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPPPG 530
GPPP G P G G GG G GPP PG G GPPPG
Sbjct: 153 GPPPLMGG-GGDP--RGPPGGMGGPPGHGGMG--GPPGHGGQGGPPGHGGMGGPPPG 204
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
G PP G PPG G G G G GPP PGG GP
Sbjct: 172 GGPPGHGGMGG-PPGHGGQGGPPGHGGMG-----GPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXP-XXXPGG----DXGPPPG 530
GPPP G PP GG G GPP P P G GPPP
Sbjct: 380 GPPPGMP--GGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPL 437
Query: 529 XXXXKXXXXXRXGRGXXXXRRAXXGPGG 446
G G GP G
Sbjct: 438 MGGGGDPRGPPGGMGGPPGHGGMGGPPG 465
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPG--GDXGPPPG 530
GPPP G P G G GG G GPP PG G GPPPG
Sbjct: 433 GPPPLMGG-GGDP--RGPPGGMGGPPGHGGMG--GPPGHGGQGGPPGHGGMGGPPPG 484
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 694 GPPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGP 539
G PP G PPG G G G G GPP PGG GP
Sbjct: 452 GGPPGHGGMGG-PPGHGGQGGPPGHGGMG-----GPPPGQGGPGGPGGPGGP 497
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 691 PPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG--PPP 533
P P G P G G G RAG GPP N GD G PPP
Sbjct: 209 PGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEK----GDCGHCPPP 259
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 691 PPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG--PPP 533
P P G P G G G RAG GPP N GD G PPP
Sbjct: 273 PGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEK----GDCGHCPPP 323
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 691 PPPXXXXTXGTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXG--PPP 533
P P G P G G G RAG GPP N GD G PPP
Sbjct: 273 PGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEK----GDCGHCPPP 323
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPP 536
G P G G G G D GP P GD GPP
Sbjct: 209 GAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGDEGPP 251
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = -1
Query: 664 GTPPGXGXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDX-GPPPGXXXXKXXXXXRXGR 488
G G G GG G + G GGD GPP GR
Sbjct: 106 GNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGR 165
Query: 487 GXXXXRRAXXGPGGRXRXAXGVV 419
G R G G R A GV+
Sbjct: 166 GGGGGRGGGGGGGAGERIAEGVL 188
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Frame = -1
Query: 721 PEEXXXQEXGPPPXXXXTXGTP--PG----XGXXGKXGGXTRAGXXXDXGPPRXNXPXXX 560
P + + PPP G P PG G G+ G G + GPP P
Sbjct: 123 PPQQPCELVTPPPCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPPGPTGPPGE 182
Query: 559 PG 554
PG
Sbjct: 183 PG 184
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -1
Query: 694 GPP-PXXXXTXGTPPGX-GXXGKXGGXTRAGXXXDXGPPRXNXPXXXPGGDXGPPPG 530
GPP P P G G G+ G G GPP + PG D P G
Sbjct: 171 GPPGPDGNAGPAGPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAG 227
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 585 GGPXSXLXPALVXPPXFPXXPXPGGVPXVXXXXGGGPXSWXXSSSG 722
GG PAL PP P P GG G GP S G
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQG 97
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 585 GGPXSXLXPALVXPPXFPXXPXPGGVPXVXXXXGGGPXSWXXSSSG 722
GG PAL PP P P GG G GP S G
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQG 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,044,966
Number of Sequences: 27780
Number of extensions: 155752
Number of successful extensions: 1512
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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