Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_D22
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051690-1|AAK93114.1|  475|Drosophila melanogaster LD23804p pro...    84   2e-16
AE014297-4531|AAF57004.1|  475|Drosophila melanogaster CG7946-PA...    84   2e-16
L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ...    29   6.5  
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ...    29   6.5  
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ...    29   6.5  
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB...    29   6.5  
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD...    29   6.5  

>AY051690-1|AAK93114.1|  475|Drosophila melanogaster LD23804p
           protein.
          Length = 475

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
 Frame = -1

Query: 671 RIKTCLCLEKADTELCLKLLDEFMELEVKPXMLLKHPTCLETVKRMRAYVGNTPSWDLSE 492
           +++ CL L +A+   CL++L++F E+E    MLL++P C++ ++R+R YVGN   W +  
Sbjct: 329 QLRECLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDL 388

Query: 491 KDALEFSKQAHLIRKQADTLYKTMKDLFT-VPDGL-SFWEFFSARVVHFKKITAKLTSD 321
            D +EF ++A  IRK +  +Y   K LF   P+   +FW  F  +V  +K  T  +  +
Sbjct: 389 SDEVEFKERAQTIRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINEN 447


>AE014297-4531|AAF57004.1|  475|Drosophila melanogaster CG7946-PA
           protein.
          Length = 475

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
 Frame = -1

Query: 671 RIKTCLCLEKADTELCLKLLDEFMELEVKPXMLLKHPTCLETVKRMRAYVGNTPSWDLSE 492
           +++ CL L +A+   CL++L++F E+E    MLL++P C++ ++R+R YVGN   W +  
Sbjct: 329 QLRECLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDL 388

Query: 491 KDALEFSKQAHLIRKQADTLYKTMKDLFT-VPDGL-SFWEFFSARVVHFKKITAKLTSD 321
            D +EF ++A  IRK +  +Y   K LF   P+   +FW  F  +V  +K  T  +  +
Sbjct: 389 SDEVEFKERAQTIRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINEN 447


>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
            protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 509  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 399
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 509  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 399
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 509  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 399
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
            isoform B protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 509  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 399
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
            isoform D protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 509  SWDLSEKDALEFSKQAHLIRKQ-ADTLYKTMKDLFTVP 399
            SWD+ ++ AL+F++Q  +   Q A  L+KT +  F+VP
Sbjct: 2526 SWDILDQSALQFARQHKVPTLQNARVLFKTQRS-FSVP 2562


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,486,699
Number of Sequences: 53049
Number of extensions: 447956
Number of successful extensions: 1426
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)