Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_D22
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical...    29   4.5  

>AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical
           protein Y17G7B.13 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -1

Query: 503 DLSEKDALEFSKQAHLIRKQADTLYKTMKDLFTVPDGLSFWEFFSARVVHFKKITA---K 333
           ++ E D ++  + A +    A+   +  +DLF +PD  SF+   + + VH   I     +
Sbjct: 85  NIVEFDTVDVHQLAKIPSLPANQKIEKFEDLFELPDEYSFFPLNTFQRVHGSVIVTNPKR 144

Query: 332 LTSDELLEMVHEPL 291
           LTS ++L+    P+
Sbjct: 145 LTSLQMLDATQLPM 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,420
Number of Sequences: 27780
Number of extensions: 232498
Number of successful extensions: 545
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)