Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D21
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 32 0.40
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 32 0.40
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.53
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.53
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 0.70
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.70
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.93
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.93
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 2.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 2.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.0
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.7
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 8.7
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 PAXAXTPX-PTXXTXRXXPPPSPXXPPTPXLPSP 424
PA P P T R PP +P PP P PSP
Sbjct: 225 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 PAXAXTPX-PTXXTXRXXPPPSPXXPPTPXLPSP 424
PA P P T R PP +P PP P PSP
Sbjct: 223 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 256
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.53
Identities = 34/134 (25%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Frame = +1
Query: 370 PXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPPGX 549
P TP P P P C P CPQ PP PPG
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKP--CPQGPPGPPGPPGPPGD 164
Query: 550 XRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXP-------XPXXPVQSHPXVXPR-GPVX 705
P S + A P P P P P QS P + GP
Sbjct: 165 SGEP--GSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPG 222
Query: 706 XXXPLXXPXSPXXP 747
P P SP P
Sbjct: 223 EAGPQGPPGSPGQP 236
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.53
Identities = 34/134 (25%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Frame = +1
Query: 370 PXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPPGX 549
P TP P P P C P CPQ PP PPG
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKP--CPQGPPGPPGPPGPPGD 164
Query: 550 XRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXP-------XPXXPVQSHPXVXPR-GPVX 705
P S + A P P P P P QS P + GP
Sbjct: 165 SGEP--GSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPG 222
Query: 706 XXXPLXXPXSPXXP 747
P P SP P
Sbjct: 223 EAGPQGPPGSPGQP 236
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 311 PXRXGPAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P P T P T + PPP+ PP P +P P
Sbjct: 170 PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPP 209
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 329 AXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
A T P T + PPP+ PP P +P P
Sbjct: 168 AEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPP 201
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.70
Identities = 39/161 (24%), Positives = 40/161 (24%)
Frame = +1
Query: 298 GNXAPXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXX 477
GN P P P N N P P P PY P P PP C
Sbjct: 53 GNDGPQPFN--PVFNIH---FNCCGAPRPSPSCCPYVPPAPLPP--PPPPASPCC---GP 102
Query: 478 XPXXXXVCPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPX 657
P CP PPP P P S + A P P
Sbjct: 103 SPVPAPCCP----PPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPPS 158
Query: 658 XPVQSHPXVXPRGPVXXXXPLXXPXSPXXPXXXPXXPXAPP 780
P P P P P P P APP
Sbjct: 159 APACCVAAPVPTNPCCQPAPRPAPCVCSAPRPVPCRCGAPP 199
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.70
Identities = 29/124 (23%), Positives = 31/124 (25%)
Frame = +1
Query: 307 APXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPX 486
AP P A P P P P PYP P P P
Sbjct: 70 APYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQ---HAVPAPA 126
Query: 487 XXXVCPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPXXPV 666
P PPP PP P + + P S P P P P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHS---APPPQPQYPQ 183
Query: 667 QSHP 678
Q P
Sbjct: 184 QQPP 187
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 310 PXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPP 444
P G PR P P P P P P PP P PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/130 (21%), Positives = 32/130 (24%)
Frame = +1
Query: 310 PXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXX 489
P P P P P P P P +PP P + P P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 490 XXVCPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPXXPVQ 669
PPP PP R P R + PP P P
Sbjct: 325 FGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRY----PSAGPGMYPPPPPSRPPAPPS 376
Query: 670 SHPXVXPRGP 699
H + P P
Sbjct: 377 GHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 310 PXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPP 444
P G PR P P P P P P PP P PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/130 (21%), Positives = 32/130 (24%)
Frame = +1
Query: 310 PXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXX 489
P P P P P P P P +PP P + P P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 490 XXVCPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPXXPVQ 669
PPP PP R P R + PP P P
Sbjct: 335 FGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRY----PSAGPGMYPPPPPSRPPAPPS 386
Query: 670 SHPXVXPRGP 699
H + P P
Sbjct: 387 GHGMIPPPPP 396
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = +1
Query: 298 GNXAPXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXX 477
G+ A P GP P P P P P P P P L +
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGGPPP 760
Query: 478 XPXXXXVCPQQXXPPPXXXXPPGXXRXP 561
P CP PPP G P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = +1
Query: 298 GNXAPXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXX 477
G+ A P GP P P P P P P P P L +
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGGPPP 760
Query: 478 XPXXXXVCPQQXXPPPXXXXPPGXXRXP 561
P CP PPP G P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/88 (25%), Positives = 24/88 (27%)
Frame = +1
Query: 298 GNXAPXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXX 477
G+ A P GP P P P P P P P P L +
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGGPPP 343
Query: 478 XPXXXXVCPQQXXPPPXXXXPPGXXRXP 561
P CP PPP G P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/134 (21%), Positives = 33/134 (24%)
Frame = +1
Query: 376 PTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPPGXXR 555
P P+ PP + PP P P PP PP R
Sbjct: 275 PCPQRQDDRTPPSSGTSAPQPPPR-GSTAAPGTRAPPATRAPPATRAPPATTRAPPATTR 333
Query: 556 XPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPXXPVQSHPXVXPRGPVXXXXPLXXPXS 735
P S P S + P P P P S+P P P
Sbjct: 334 -PAPASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSY 392
Query: 736 PXXPXXXPXXPXAP 777
P P P P
Sbjct: 393 PAEPAYSVPPPAKP 406
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P P P + PPP P PP P L +P P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPP-PPPPPTLKAPPP 100
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 377 PPPSPXXPPTPXLPSPXP 430
PPP P PPT P P P
Sbjct: 85 PPPPPPPPPTLKAPPPPP 102
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = +2
Query: 350 PTXXTXRXXPPPSPXXPP 403
P + PPP P PP
Sbjct: 58 PNDNIVKATPPPPPPPPP 75
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 33/133 (24%), Positives = 34/133 (25%)
Frame = -3
Query: 779 GGAXGXXGXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGGXSXEXDXXVXAG 600
GG G G G G G G G G G G G GG + G
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGC--GGGGGCGGGCAPPPPPPACGG 120
Query: 599 XAXRTXXXXEXXXGXRXXPGGXXXXGGGXXCWGQTXXSXGXXXXXXXTXXSXGGXFXGXX 420
G GG GGG C G G GG G
Sbjct: 121 GCG--GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 178
Query: 419 XXXGG*GXXXGLG 381
GG G G G
Sbjct: 179 GGGGGGGCGGGCG 191
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 382 PKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPP 543
P P P PP P PP +C P P PPP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPP--PICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/113 (22%), Positives = 26/113 (23%)
Frame = +1
Query: 442 PXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACPAXTXXS 621
P VC P + P P P P V PA
Sbjct: 30 PEPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAYNP 89
Query: 622 XSXXXPPXPXPXXPVQSHPXVXPRGPVXXXXPLXXPXSPXXPXXXPXXPXAPP 780
PP P P P P P P P P P APP
Sbjct: 90 YPCATPPCPLPYIPEPVAPVPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPP 142
Score = 28.7 bits (61), Expect = 5.0
Identities = 36/135 (26%), Positives = 38/135 (28%), Gaps = 4/135 (2%)
Frame = +1
Query: 367 APXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQ---QXXPPPXXXX 537
AP P P P PY P P C P V PQ Q P P
Sbjct: 107 APVPAPAPVYEPYACAAPPCPPPTPVYEPYAC---AAPPCPAPVAPQPVIQHVPVPVPVQ 163
Query: 538 PPGXXRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXP-XXPVQSHPXVXPRGPVXXXX 714
P R P V P PP P P PV + P PR P+
Sbjct: 164 VPVPIRVP--------VPVPVPTPVYQPTYCAVPPCPAPAATPVYAQP--APR-PMPVYA 212
Query: 715 PLXXPXSPXXPXXXP 759
P P P P
Sbjct: 213 PAPACAQPPCPAYNP 227
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P A TP PP+P PP P P P P
Sbjct: 336 PQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +1
Query: 637 PPXPXPXXPVQSHPXVXPRGPVXXXXP--LXXPXSPXXPXXXPXXPXAPP 780
PP P P P P GP P P P P P P PP
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.8
Identities = 32/128 (25%), Positives = 32/128 (25%)
Frame = -3
Query: 758 GXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGGXSXEXDXXVXAGXAXRTXX 579
G G G G G G G GW G G G GG D G
Sbjct: 23 GGWGGGPGRWGGWGGNRWGGG--GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGG 80
Query: 578 XXEXXXGXRXXPGGXXXXGGGXXCWGQTXXSXGXXXXXXXTXXSXGGXFXGXXXXXGG*G 399
G GG GGG WG G G G G G
Sbjct: 81 NG-GGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGG 139
Query: 398 XXXGLGVG 375
G G G
Sbjct: 140 GRGGDGRG 147
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 767 GXXGXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGG 636
G G G G G GP G G W G G G GG
Sbjct: 124 GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGG 167
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 344 PXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P P R PP P PTP P+P P
Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEP 564
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -1
Query: 784 GXGARXXGXGXXXXXRGXXGAXXDXXXGXGPGXXLXGGFGPG 659
G G G G G G G GP GG+GPG
Sbjct: 195 GYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
Score = 28.3 bits (60), Expect = 6.6
Identities = 31/137 (22%), Positives = 33/137 (24%), Gaps = 2/137 (1%)
Frame = -1
Query: 784 GXGARXXGXGXXXXXRGXXGAXXDXXXGXGPGXXLXGGFGPGXXXXGXEXXRGXWXGXXX 605
G G G +G G D G G G GG+G G G G
Sbjct: 81 GSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGM 140
Query: 604 XDXPXGXXXXXXXXXGXXXGRXARXGXG--XXXXVGGKXXXXXAXXARGXXPXRAXXAXX 431
P G G G G G GG G
Sbjct: 141 GGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGM 200
Query: 430 GGWXXXXGGRGXXGAWG 380
GG GG G G G
Sbjct: 201 GGGGYGGGGMGGGGYGG 217
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 779 GGAXGXXGXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGG 636
GG G G G G G G GP G G G G G GG
Sbjct: 197 GGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG-GGYGMGG 243
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.0
Identities = 33/137 (24%), Positives = 33/137 (24%)
Frame = -3
Query: 779 GGAXGXXGXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGGXSXEXDXXVXAG 600
GG G G G G G G P G G G G G GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGG---GGGGCGGGGGCAPPPAPCGGG 82
Query: 599 XAXRTXXXXEXXXGXRXXPGGXXXXGGGXXCWGQTXXSXGXXXXXXXTXXSXGGXFXGXX 420
G GG GGG C G G GG G
Sbjct: 83 CGG---GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 419 XXXGG*GXXXGLGVGXG 369
G G G G
Sbjct: 140 GGGSSGGCGGGSSGGCG 156
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.0
Identities = 33/137 (24%), Positives = 33/137 (24%)
Frame = -3
Query: 779 GGAXGXXGXXXGXQGEXGXXXGXXXXTGPRGXTXGWLWTGXXGXGXGGXSXEXDXXVXAG 600
GG G G G G G G P G G G G G GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGG---GGGGCGGGGGCAPPPAPCGGG 82
Query: 599 XAXRTXXXXEXXXGXRXXPGGXXXXGGGXXCWGQTXXSXGXXXXXXXTXXSXGGXFXGXX 420
G GG GGG C G G GG G
Sbjct: 83 CGG---GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 419 XXXGG*GXXXGLGVGXG 369
G G G G
Sbjct: 140 GGGSSGGCGGGSSGGCG 156
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P P P PPP PP P +P P P
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXX--PPTPXLPSPXP 430
P A P P PPP P PP P P P P
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPP 76
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSP 424
P A P PPP P PP P +P P
Sbjct: 59 PCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 499 CPQQXXPPPXXXXPPGXXRXPXXXSXXXXVRXACP 603
CP Q PPP PP P R +CP
Sbjct: 60 CPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 344 PXPTXXTXRXXPPPSPXXPPTPXLPSP 424
P P PPP+P PP P P P
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPPP 149
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 329 AXAXTPXPTXXTXRXXPPPSPXXP-PTPXLPSPXP 430
A + +P P+ PPPS P P LPSP P
Sbjct: 400 ANSQSPRPSQPLQTIAPPPSQSSNIPPPSLPSPRP 434
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 329 AXAXTPXPTXXTXRXXPPPSPXXP-PTPXLPSPXP 430
A + +P P+ PPPS P P LPSP P
Sbjct: 461 ANSQSPRPSQPLQTIAPPPSQSSNIPPPSLPSPRP 495
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 329 AXAXTPXPTXXTXRXXPPPSPXXP-PTPXLPSPXP 430
A + +P P+ PPPS P P LPSP P
Sbjct: 425 ANSQSPRPSQPLQTIAPPPSQSSNIPPPSLPSPRP 459
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 310 PXPXGAGPRXNXXPXXXNXAPXPTPKPXXXPYPPXXXXXPXKXPP 444
P P G G P P P P P PP P PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +2
Query: 311 PXRXGPAXAXTPXPTXXTXRXXP--PPSPXXPPTPXLPSPXP 430
P P TP P R P PPSP P PSP P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.7
Identities = 34/137 (24%), Positives = 36/137 (26%), Gaps = 1/137 (0%)
Frame = +1
Query: 370 PXPTPKPXXXPYPPXXXXXPXKXPPXLXXVCXXXXXXPXXXXVCPQQXXPPPXXXXPPGX 549
P TP P P P C P CPQ PP PPG
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKP--CPQGPPGPPGPPGPPGD 164
Query: 550 XRXPXXXSXXXXVRXACPAXTXXSXSXXXPPXPXPXXPVQSHPXVXPRG-PVXXXXPLXX 726
P S + A P PP P P PRG P+ P
Sbjct: 165 SGEP--GSPGLPGQDAAPGEPGPK-GPKGPPG-APGAPEHQESQECPRGEPLIPGEP--G 218
Query: 727 PXSPXXPXXXPXXPXAP 777
P P P P P
Sbjct: 219 PPGEAGPQGPPGSPGQP 235
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 326 PAXAXTPXPTXXTXRXXPPPSPXXPPTPXLPSPXP 430
P A P P + PPPS P P P+P P
Sbjct: 284 PQPAVPPKPAKISVAD-PPPSTIAPAAPSAPAPAP 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,356,116
Number of Sequences: 27780
Number of extensions: 164381
Number of successful extensions: 1577
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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