Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_D17
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...    37   0.015
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...    37   0.015
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...    37   0.015
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    35   0.082

>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -2

Query: 478 VPXXVXXAXAXIKTXXTMAIXXXGPTAXKXGXNYQPPXXV 359
           VP  V  A A IKT  T+      PT  K G NYQPP  V
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVV 363


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -2

Query: 478 VPXXVXXAXAXIKTXXTMAIXXXGPTAXKXGXNYQPPXXV 359
           VP  V  A A IKT  T+      PT  K G NYQPP  V
Sbjct: 324 VPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVV 363


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -2

Query: 478 VPXXVXXAXAXIKTXXTMAIXXXGPTAXKXGXNYQPPXXV 359
           VP  V  A A IKT  T+      PT  K G NYQPP  V
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVV 363


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = -2

Query: 478 VPXXVXXAXAXIKTXXTMAIXXXGPTAXKXGXNYQPPXXV 359
           VP  V  A   IKT  T+      PT  K G NYQPP  V
Sbjct: 405 VPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAV 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,473,073
Number of Sequences: 37544
Number of extensions: 125098
Number of successful extensions: 308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)