Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_D16
         (1079 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   1.0  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   1.0  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   4.3  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   4.3  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   4.3  
AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    25   6.3  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    25   6.3  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    25   6.7  
Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    29   7.6  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   7.6  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   7.6  
AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like ...    29   7.6  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   7.6  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   7.6  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 778 PPPPXXGGGXXXXXXXXXXPPPPPP 704
           PPPP    G          PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPP 637



 Score = 25.0 bits (52), Expect(2) = 1.0
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +3

Query: 753 PPPXXGGGGXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXPK 878
           PPP  G  G                        PPPPPP P+
Sbjct: 577 PPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 618



 Score = 25.0 bits (52), Expect(2) = 1.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 852 PPPPPPXPKXXXXXXXXPPP 911
           PPPPPP P          PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPP 650


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 778 PPPPXXGGGXXXXXXXXXXPPPPPP 704
           PPPP    G          PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPP 463



 Score = 25.0 bits (52), Expect(2) = 1.0
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +3

Query: 753 PPPXXGGGGXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXPK 878
           PPP  G  G                        PPPPPP P+
Sbjct: 403 PPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 444



 Score = 25.0 bits (52), Expect(2) = 1.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 852 PPPPPPXPKXXXXXXXXPPP 911
           PPPPPP P          PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPP 476


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 778 PPPPXXGGGXXXXXXXXXXPPPPPP 704
           PPPP   GG          PPPPPP
Sbjct: 95  PPPPPMMGGIPPPPPMFGAPPPPPP 119



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 778 PPPPXXGGGXXXXXXXXXXPPPPPP 704
           PPPP  GG           PPPPPP
Sbjct: 96  PPPPMMGGIPPPPPMFGAPPPPPPP 120


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP  GG           PPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPP 303



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 775 PPPXXGGGXXXXXXXXXXPPPPPP 704
           PPP   GG          PPPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPP 303


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP  GG           PPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPP 324



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 775 PPPXXGGGXXXXXXXXXXPPPPPP 704
           PPP   GG          PPPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPP 324


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP  GG           PPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPP 309



 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 775 PPPXXGGGXXXXXXXXXXPPPPPP 704
           PPP   GG          PPPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPP 309


>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +3

Query: 705 GGGGGGXXXXXXXXXXPPPXXGGGG 779
           GGG GG          PPP  GGGG
Sbjct: 198 GGGSGGSGGGSGRFPPPPPPYGGGG 222


>Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical
           protein C15C6.3 protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 852 PPPPPPXPKXXXXXXXXPPP 911
           PPPPPP P+        PPP
Sbjct: 477 PPPPPPPPENEPEEFPPPPP 496


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 852 PPPPPPXPKXXXXXXXXPPP 911
           PPPPPP P+        PPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPP 581


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 25.0 bits (52), Expect(2) = 6.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 705 GGGGGGXXXXXXXXXXPPPXXGGGG 779
           GGGGGG          P P  GG G
Sbjct: 60  GGGGGGCGGGGGCAPPPAPCGGGCG 84



 Score = 22.2 bits (45), Expect(2) = 6.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 687 FFFXXXGGGGGG 722
           F F   GGGGGG
Sbjct: 20  FLFPSAGGGGGG 31


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 25.0 bits (52), Expect(2) = 6.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 705 GGGGGGXXXXXXXXXXPPPXXGGGG 779
           GGGGGG          P P  GG G
Sbjct: 60  GGGGGGCGGGGGCAPPPAPCGGGCG 84



 Score = 22.2 bits (45), Expect(2) = 6.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 687 FFFXXXGGGGGG 722
           F F   GGGGGG
Sbjct: 20  FLFPSAGGGGGG 31


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 25.4 bits (53), Expect(2) = 6.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 852 PPPPPPXPK 878
           PPPPPP PK
Sbjct: 26  PPPPPPPPK 34



 Score = 21.8 bits (44), Expect(2) = 6.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +3

Query: 855 PPPPPXPKXXXXXXXXPPP 911
           PPPPP P          PP
Sbjct: 50  PPPPPAPYPQQAVPAPAPP 68


>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 778 PPPPXXGGGXXXXXXXXXXPPPPPP 704
           PPPP  GGG          PPPPPP
Sbjct: 42  PPPPPCGGGYEAP------PPPPPP 60


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP   GG          PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP   GG          PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765


>AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like
           (grd related) protein20 protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 16/53 (30%), Positives = 16/53 (30%)
 Frame = -2

Query: 910 GGGXXXXXXXXXGXGGGGGGXXXXXXXXXXXXXXXXXXXXGXXXPPPPXXGGG 752
           GGG         G G GGGG                        PPPP  GGG
Sbjct: 21  GGGGGGGCGGGCGGGCGGGGGGGCLPTLGCSVISFNVPTLKLPPPPPPPCGGG 73


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 777 PPPPXXGGGXXXXXXXXXXPPPPP 706
           PPPP   GG          PPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP 348


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 852  PPPPPPXPKXXXXXXXXPPP 911
            PPPPPP P         PPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPP 1360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,500,069
Number of Sequences: 27780
Number of extensions: 313749
Number of successful extensions: 5597
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2984
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)