Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D08
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 34 0.13
12_02_1174 - 26696869-26698191 31 0.94
10_01_0270 - 2876907-2877547,2877838-2878012 30 2.2
10_03_0023 - 7151465-7152111,7152222-7152405 29 2.9
12_01_0302 - 2286171-2286341,2286747-2286968 29 3.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 3.8
01_06_0654 + 30911416-30912071,30913664-30914348 29 3.8
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.0
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.0
01_06_0146 + 26969011-26969995,26970878-26970930 29 5.0
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 6.6
11_06_0610 - 25449085-25453284 28 8.8
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 28 8.8
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 8.8
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -2
Query: 726 PLCIKPPXPXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAP 547
P C+ PP P P+ +P S PP + NP TP P P + P
Sbjct: 54 PYCVYPPPPTKPALPAPLPPTPASPGDSPPSIAPAG-NPPTPAQAGAPPPSIAPGTGSPP 112
Query: 546 SAYLTPSSLG 517
A TP + G
Sbjct: 113 PATTTPPAPG 122
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 0.94
Identities = 24/80 (30%), Positives = 30/80 (37%)
Frame = -2
Query: 732 VSPLCIKPPXPXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSE 553
+SP+ PP P + P + P QPPP L P P P +KPP+
Sbjct: 119 LSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPP-PPRPPSVKPPVVQP 177
Query: 552 APSAYLTPSSLGMXKGVSPP 493
P P SL PP
Sbjct: 178 KPQ---PPPSLQPPSPPPPP 194
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -2
Query: 687 YINPIIKSPDSIHQPPPDLTSIS---INPLTPX*KEFAPGLKPPLSSEAPSAYLTPS 526
Y NP +P + H+PPP T + + TP P K PL + +P Y P+
Sbjct: 170 YKNPSPPAPAAYHKPPPSYTHPAPPVYSYPTPAYSHPTPVYKQPLPTPSPPIYHPPA 226
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = -2
Query: 729 SPLCIKPPX---PXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLS 559
SP I PP P I P++ P ++ PPP S+ P P PG+ P +
Sbjct: 208 SPPSILPPLTPQPPPSSLIPPVLPLP-LLNPPPPPPPPPSLLPPVPLLPPLIPGVPPASA 266
Query: 558 SEAPSAYLTP 529
S + TP
Sbjct: 267 SRSGRPVSTP 276
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 83 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 184
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -2
Query: 663 PDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYF 487
P + PPP SIS P P AP P + + PS+ PS + P+F
Sbjct: 93 PPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFPSSSANPSPPDAYPFTNYPFF 151
>01_06_0654 + 30911416-30912071,30913664-30914348
Length = 446
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 733 GXAXMHQATXPXXXRXHQPDHQIPGFHTPTTPRLNIHFHQSPDAVXEG 590
G A +H +T P H DH G H+ T +L + +SP V G
Sbjct: 27 GAAGVHPSTSPCFCTLHLQDHPSAGSHS-RTAQLPLASSESPGPVAAG 73
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 75 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 221
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 242 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 63
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 62 ILHSF 48
+LHSF
Sbjct: 1408 LLHSF 1412
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 711 PPXPXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLT 532
PP P +P SP + PPP L + + P TP + P+ S+AP+
Sbjct: 23 PPPPTPHPATDPPPISPQNPTPPPPPLPASAAAPTTPS-PNHSGDPSRPIPSQAPAPPPP 81
Query: 531 PSS 523
P++
Sbjct: 82 PTA 84
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -2
Query: 663 PDSIHQP-PPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYF 487
P HQP PP L S P P +P +PPL + P S +PP
Sbjct: 490 PSPRHQPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPAPPSV 545
Query: 486 QVNDESQASRLISR 445
Q + + S L+ +
Sbjct: 546 QTSPPTPQSALVEQ 559
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -2
Query: 726 PLCIKPPXPXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAP 547
P+ PP P+I P I PPP IS P AP + PP ++P
Sbjct: 1141 PVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSP 1200
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -2
Query: 708 PXPXDXGYINPIIKSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYL 535
P P + P+I +P + PPP I PL P F PP+++ APS L
Sbjct: 359 PPPLPPATVEPVISAP-MVEPPPP---PAMITPLPPSTPVFTLPPPPPVTT-APSTAL 411
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 443 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 354
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,688,784
Number of Sequences: 37544
Number of extensions: 435325
Number of successful extensions: 1347
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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