Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D07
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 2.5
U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 4.4
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 4.4
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 4.4
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 29 4.4
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 29 4.4
U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in ge... 28 5.8
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 5.8
AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen stru... 28 5.8
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 28 5.8
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : short... 28 5.8
AC006630-5|AAK68323.1| 335|Caenorhabditis elegans Collagen prot... 28 5.8
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/128 (20%), Positives = 38/128 (29%)
Frame = +1
Query: 196 PQNDYRLNPIEPHHSDSTKPTXTAQCAPKARRRRYPSC**DGTPSPGKXXXXXXXXXXXX 375
PQ + P + PT A PK ++ P +P K
Sbjct: 300 PQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPV----QQNPPKPAVQQAQAPVVQ 355
Query: 376 GAQEPPCAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTPFRAP 555
A PP +PP P P ++P P + +A + P P
Sbjct: 356 QAPAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPP 415
Query: 556 XPXXTP*P 579
P +P P
Sbjct: 416 KPTPSPAP 423
>U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical
protein F47B7.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 135 SPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLI 314
+PPP R + A T + RLP+ A R H H Y++ + G P+P + +
Sbjct: 100 TPPPPPERSYHADHYAVDTYDS-RLPSTSQLAAS-RDHMPHDYQSSNSMGYPTPSILQVG 157
Query: 315 GRHSIPGKIPQDVVS 359
G + ++ +D+VS
Sbjct: 158 GMQVMLQRLTKDMVS 172
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 385 EPP--CAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTP 543
+PP A+ PD+ + HP+ HP+AP + + + P P P
Sbjct: 21 DPPKHVTATHPDELTTASHPQPTHPSAPQDPSPAVPSTPVRVPYPTAPPPIPPAP 75
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 457 APTGDERELRARAAHSXFFAVXPXRDPTPFRAPXPXXTP*P 579
AP E +L+A S P R P+P R P P P P
Sbjct: 862 APRQTETQLKAPPPPSVARQPSPVRQPSPIREPSPIREPEP 902
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 165 VVSCEKLGEVKDLGSSLPPFFLSGGAGVRHNPVRYPPRP 49
+VS + V D +SL +L+GG +P PPRP
Sbjct: 719 IVSGQAAKAVVDGVNSLVSSYLTGGTNAAQSPANAPPRP 757
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 165 VVSCEKLGEVKDLGSSLPPFFLSGGAGVRHNPVRYPPRP 49
+VS + V D +SL +L+GG +P PPRP
Sbjct: 719 IVSGQAAKAVVDGVNSLVSSYLTGGTNAAQSPANAPPRP 757
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +3
Query: 279 EGSPSPVPILLIGRHSIPGKIPQD----VVSETHRERCTGATLRRLTTGPTAEYRAPPHP 446
E SPSP I S ++P+D V SE+HRE +TT + A H
Sbjct: 1729 ESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISASGAEQHS 1788
Query: 447 APDS 458
DS
Sbjct: 1789 GQDS 1792
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +1
Query: 388 PPCAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTP 543
PP +++PP Q P HP+ P G R + + P + P P
Sbjct: 337 PPLSSAPPFQHPQQHHPQLPPPPVHQGMGRGYHHNSPPQDPAPIVPVQAPPP 388
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/57 (26%), Positives = 20/57 (35%)
Frame = +1
Query: 391 PCAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTPFRAPXP 561
PC PP Q + G + P P G +E A + + P P P P
Sbjct: 160 PCIICPPGPQGAVGQQGPKGPPGPKGKSQERAADGKNGEPGMIGPPGPPGGVGEPGP 216
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/57 (26%), Positives = 20/57 (35%)
Frame = +1
Query: 391 PCAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTPFRAPXP 561
PC PP Q + G + P P G +E A + + P P P P
Sbjct: 160 PCIICPPGPQGAVGQQGPKGPPGPKGKSQERAADGKNGEPGMIGPPGPPGGVGEPGP 216
>U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform b protein.
Length = 603
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 117 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 257
E S GPS SH R+ ST P + PT PH APP+ H
Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 117 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 257
E S GPS SH R+ ST P + PT PH APP+ H
Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533
>AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen
structural gene, probablya critical component of the
embryonically derived outerlayer of the L1 cuticle (31.8
kD) (col-59) protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 376 GAQEPPCAASPPDQQPSTGHPRTRHPTAPTG 468
G Q PC PP Q G P + P P G
Sbjct: 170 GLQSEPCMICPPGAQGLGGAPGAKGPQGPRG 200
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 150 KLGEVKDLGSSLPPFFLSGGAGVRHN 73
+LG KD G+ L PFFL G A R++
Sbjct: 56 RLGIPKDTGTRLLPFFLDGVAKTRYD 81
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 150 KLGEVKDLGSSLPPFFLSGGAGVRHN 73
+LG KD G+ L PFFL G A R++
Sbjct: 444 RLGIPKDTGTRLLPFFLDGVAKTRYD 469
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Frame = +1
Query: 166 ALKKAREALAPQNDY---RLNPIE---PHH-SDSTKPTXTAQCAPKARRRR 297
A + R +L P D RL+P++ PHH S+STK + T+ +PK R ++
Sbjct: 175 AARLKRLSLTPYPDPQLPRLSPLQQQQPHHRSNSTKKSVTSSVSPKPRTQQ 225
>AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 14 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 376 GAQEPPCAASPPDQQPSTGHPRTRHPTAPTG 468
G Q PC PP Q G P + P P G
Sbjct: 170 GLQSEPCMICPPGAQGLGGAPGAKGPQGPRG 200
>AC006630-5|AAK68323.1| 335|Caenorhabditis elegans Collagen protein
165 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 376 GAQEPPCAASPPDQQPSTGHPRTRHPTAPTG 468
G Q PC PP Q G + PT P G
Sbjct: 183 GLQSEPCMICPPGPQGLMGQAGKKGPTGPRG 213
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 388 PPCAASPPDQQPSTGHPRTRHPTAPTGDERE 480
PP AS P + G P R PT + +E E
Sbjct: 320 PPVVASRPATAKAPGTPANRQPTPESSEEEE 350
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 382 QEPPCAASPPDQQPSTGH-PRTRHPTAPTGDERELRARAAHSXFFAVXPXRDPTPFRAPX 558
Q+ P A PP QQ + G+ P T +P+AP + R A + P P + P
Sbjct: 146 QQGP-GAQPPQQQNNGGYVPPTVYPSAPPPVQPGYNPRPASGQSYPSGPQVPPAYGQYPQ 204
Query: 559 P 561
P
Sbjct: 205 P 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,414,671
Number of Sequences: 27780
Number of extensions: 394780
Number of successful extensions: 1598
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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