Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D06
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 33 1.5
CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 33 1.5
BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 33 1.5
BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 33 1.5
DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived fa... 31 4.5
AL117396-1|CAB55898.1| 137|Homo sapiens hypothetical protein pr... 31 4.5
Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase inh... 31 6.0
X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of metal... 31 6.0
U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of metal... 31 6.0
U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of metal... 31 6.0
U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of metal... 31 6.0
U16752-1|AAA97434.1| 93|Homo sapiens cytokine SDF-1-beta protein. 31 6.0
U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of metal... 31 6.0
U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of metal... 31 6.0
S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein. 31 6.0
L36033-1|AAB39332.1| 93|Homo sapiens pre-B cell stimulating fa... 31 6.0
L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissu... 31 6.0
CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein. 31 6.0
BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of met... 31 6.0
BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase i... 31 6.0
AY802782-1|AAV49999.1| 93|Homo sapiens chemokine (C-X-C motif)... 31 6.0
AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase i... 31 6.0
>L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha
protein.
Length = 598
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 654 P*QGNPXPNLHTPRHDVCKRSVRSRGPHQLETPS 553
P +G+ + TP + KRSV +R PHQL +PS
Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPS 149
>CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein.
Length = 598
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 654 P*QGNPXPNLHTPRHDVCKRSVRSRGPHQLETPS 553
P +G+ + TP + KRSV +R PHQL +PS
Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPS 149
>BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 654 P*QGNPXPNLHTPRHDVCKRSVRSRGPHQLETPS 553
P +G+ + TP + KRSV +R PHQL +PS
Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPS 149
>BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 654 P*QGNPXPNLHTPRHDVCKRSVRSRGPHQLETPS 553
P +G+ + TP + KRSV +R PHQL +PS
Sbjct: 116 PSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPS 149
>DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived
factor 1 delta protein.
Length = 140
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = -1
Query: 587 AHAARTNLKPLQVIQSRFCRIAVGAPWFQRNVDLHDDLELDPVSKYLQSASLRHFEKAAR 408
+H AR N+K L+++ + C + + A N + D +L + +YL+ A L + AA
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKA-LNNLISAAP 95
Query: 407 HENPLVVAAGNYIPDP 360
++ A P P
Sbjct: 96 AGKRVIAGARALHPSP 111
>AL117396-1|CAB55898.1| 137|Homo sapiens hypothetical protein
protein.
Length = 137
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3
Query: 270 HRSPSSPNPSLATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGR 139
H P SPN S +S T+ HSP S P GS F+ GR
Sbjct: 61 HPFPHSPNSSYPNSPGSSSSTYPHSPTSSDP----GSPFQMPGR 100
>Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 170
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 135 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 168
>U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>U16752-1|AAA97434.1| 93|Homo sapiens cytokine SDF-1-beta protein.
Length = 93
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = -1
Query: 587 AHAARTNLKPLQVIQSRFCRIAVGAPWFQRNVDLHDDLELDPVSKYLQSASLRHFE 420
+H AR N+K L+++ + C + + A N + D +L + +YL+ A + F+
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFK 92
>U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 precursor protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>L36033-1|AAB39332.1| 93|Homo sapiens pre-B cell stimulating
factor homologue protein.
Length = 93
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = -1
Query: 587 AHAARTNLKPLQVIQSRFCRIAVGAPWFQRNVDLHDDLELDPVSKYLQSASLRHFE 420
+H AR N+K L+++ + C + + A N + D +L + +YL+ A + F+
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFK 92
>L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissue
inhibitor protein.
Length = 197
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 162 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 195
>CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase 3 (Sorsby fundus dystrophy,
pseudoinflamm protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
>AY802782-1|AAV49999.1| 93|Homo sapiens chemokine (C-X-C motif)
ligand 12 (stromal cell-derived factor 1) protein.
Length = 93
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = -1
Query: 587 AHAARTNLKPLQVIQSRFCRIAVGAPWFQRNVDLHDDLELDPVSKYLQSASLRHFE 420
+H AR N+K L+++ + C + + A N + D +L + +YL+ A + F+
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFK 92
>AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 576 GRVSEHYACIRHDGAYASLVXGYLVTEGQFASST 677
G S+HYACIR G Y S G+ + ++T
Sbjct: 176 GYQSKHYACIRQKGGYCSWYRGWAPPDKSIINAT 209
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,763,422
Number of Sequences: 237096
Number of extensions: 2520674
Number of successful extensions: 5753
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5748
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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