Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D06
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 31 0.68
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 31 1.2
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.8
AC006729-10|AAL32234.1| 487|Caenorhabditis elegans Hypothetical... 28 6.4
AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical ... 28 6.4
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = -1
Query: 668 SKLSLRNK---VTLYQTCIRPVMTYASVVFAHAARTNLKPLQVIQSRFCR 528
+K S NK + LY+T IRP + Y +VV + +++ K ++ +Q+ F R
Sbjct: 210 NKYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -1
Query: 644 VTLYQTCIRPVMTYASVVFAHAARTNLKPLQVIQSRFCR 528
+ LY+T IRP + Y +VV + +++ K ++ +Q+ F R
Sbjct: 191 ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 348 GKPSTSPKARHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSFSPDLL 169
G+ S+ K RH G S S++ + H+ +P LAT + + +P + +P L
Sbjct: 944 GRASSEKKKRHVGGSSSSSQ--HHHHHQQQQTPLLRLATPLTPEPSSGTVTPRAITPSPL 1001
Query: 168 SGSRFRSGG 142
S S SGG
Sbjct: 1002 SSSLNTSGG 1010
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Frame = -1
Query: 647 KVTLYQTCIRPVMTYASV--VFAHAARTNLKPLQVIQSRFCRIAVGAPWFQRNVDLHDDL 474
K+ +++ P++ + V A R N + + V+ + F P+FQR + L D+
Sbjct: 142 KMVWFESPSNPLLKVVDIAAVVQTAKRANPEIVVVVDNTFM-----TPYFQRPLSLGADI 196
Query: 473 ELDPVSKY-------LQSASLRHFEKAARHENPLVVAAGNYIPDPVD-RLVNRRRRPKHV 318
+ ++KY + A++ + ++ +H + + A G +P P D LVNR + HV
Sbjct: 197 AVHSITKYINGHSDIIMGAAITNNDEFQQHLHFMQRAIGG-VPSPFDCFLVNRGLKTLHV 255
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 ELDPVSKYLQSASLRH--FEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDP 306
E+D +SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 3753 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 3807
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 ELDPVSKYLQSASLRH--FEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDP 306
E+D +SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 4707 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 4761
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 ELDPVSKYLQSASLRH--FEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDP 306
E+D +SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 5610 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 5664
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 ELDPVSKYLQSASLRH--FEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDP 306
E+D +SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 6513 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 6567
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 ELDPVSKYLQSASLRH--FEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDP 306
E+D +SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 7416 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 7470
>AC006729-10|AAL32234.1| 487|Caenorhabditis elegans Hypothetical
protein Y24D9A.1b protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 336 TSPKARHHGSS*STNGAFRQYKHRSPSSPN--PSLATKGSTSELTHRHS 196
TS +R+H SS ST + + S SP+ S ++K STS +T +S
Sbjct: 196 TSSSSRYHNSSNSTPRSMNSAPNSSRVSPSFMSSSSSKASTSHVTTNNS 244
>AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical
protein Y24D9A.1a protein.
Length = 670
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 336 TSPKARHHGSS*STNGAFRQYKHRSPSSPN--PSLATKGSTSELTHRHS 196
TS +R+H SS ST + + S SP+ S ++K STS +T +S
Sbjct: 196 TSSSSRYHNSSNSTPRSMNSAPNSSRVSPSFMSSSSSKASTSHVTTNNS 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,190,644
Number of Sequences: 27780
Number of extensions: 373650
Number of successful extensions: 1021
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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