BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_D04
(827 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 33 0.36
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 33 0.36
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 32 0.83
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 32 0.83
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 30 3.4
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 30 3.4
AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB... 29 5.9
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 587 PPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
PP P P P PQ P P P P PR P
Sbjct: 70 PPQTRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPP 104
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 679 PXXTXXSRPXSXPXRPSSXPXTXPPXPNPKXXPXTPPXQNPXXP 810
P + P P RP P PP P P P P P P
Sbjct: 201 PTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTP 244
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 587 PPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
PP PRP P P P P P PR P
Sbjct: 121 PPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPP 155
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 587 PPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
PP P P P PQ P P P P PR P
Sbjct: 70 PPQTRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPP 104
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 679 PXXTXXSRPXSXPXRPSSXPXTXPPXPNPKXXPXTPPXQNPXXP 810
P + P P RP P PP P P P P P P
Sbjct: 201 PTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTP 244
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 587 PPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
PP PRP P P P P P PR P
Sbjct: 121 PPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPP 155
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 32.3 bits (70), Expect = 0.83
Identities = 36/154 (23%), Positives = 45/154 (29%)
Frame = +3
Query: 363 PXXSXPTAPPTLXPXXSRLXGPXSXRXR*XVLXDPGRPPEXVQTSQXXXXXXXXXXXXXX 542
P PT PPT P ++ P + R L P PP ++
Sbjct: 201 PPTRPPTPPPTYLPPTNKPLPPVTTR-----LPPPPPPPRTPPPTRPPTRPPTTRP---- 251
Query: 543 XGLSPAXXXPPXXKPXPPTNXPXLXLXLNPNXXGLXPXPXXXXTCXXXNLPXTPXXXPXP 722
PA PP KP PP +P P T P P P
Sbjct: 252 ----PATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPLP 307
Query: 723 PLVTTXNXPPXSQPEKXXXXSXXSESXXSXPXRT 824
P VTT PP P ++ + P T
Sbjct: 308 P-VTTRLPPPPPPPRTPPPTRPPTKPPTTRPPAT 340
Score = 31.5 bits (68), Expect = 1.5
Identities = 32/134 (23%), Positives = 39/134 (29%)
Frame = +3
Query: 363 PXXSXPTAPPTLXPXXSRLXGPXSXRXR*XVLXDPGRPPEXVQTSQXXXXXXXXXXXXXX 542
P PT PPT P + L P + + V PP +T
Sbjct: 238 PPTRPPTRPPTTRPPATYL--PPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTRP- 294
Query: 543 XGLSPAXXXPPXXKPXPPTNXPXLXLXLNPNXXGLXPXPXXXXTCXXXNLPXTPXXXPXP 722
PA PP KP PP P P T P P P
Sbjct: 295 ----PATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPP 350
Query: 723 PLVTTXNXPPXSQP 764
P+ T PP ++P
Sbjct: 351 PVTTRRPTPPPTRP 364
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 703 PXSXPXRPSSXPXTXPPXPNPKXXPXT 783
P P RP + P T PP P P P T
Sbjct: 190 PTRPPTRPPTRPPTRPPTPPPTYLPPT 216
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 700 RPXSXPXRPSSXPXTXPPXPNPKXXPXTPPXQNP 801
R P RP + P T PP P P PP P
Sbjct: 181 RTTQPPTRPPTRPPTRPPTRPPTRPPTPPPTYLP 214
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.83
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 703 PXSXPXRPSSXPXTXPPXPNPKXXPXTPPXQNPXXP 810
P P P++ P T PP P P TPP P P
Sbjct: 168 PIYTPTYPAAHPPTQPPTYPPPTHPPTPPPTPPTNP 203
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 557 GXXXTTXXQAPPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
G TT Q PP P P P P S P P P P P P
Sbjct: 228 GPPGTTYPQPPPP--PPPPPPPPPSYPYPPYPYPPPGPYPGPWIP 270
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 557 GXXXTTXXQAPPSHXXPRPXPXPQSQPXRPXPXXXPXXNXXPRXP 691
G TT Q PP P P P P S P P P P P P
Sbjct: 230 GPPGTTYPQPPPP--PPPPPPPPPSYPYPPYPYPPPGPYPGPWIP 272
>AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB,
isoform B protein.
Length = 409
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 703 PXSXPXRPSSXPXTXPPXPNPKXXPXTPPXQNPXXP 810
P P RP+ P PP P P P PP +P P
Sbjct: 217 PFYKPSRPNRRP---PPPPPPPPPPPPPPTLSPSLP 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,579,746
Number of Sequences: 53049
Number of extensions: 295998
Number of successful extensions: 2296
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -