Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_D01
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121677-1|AAM52004.1|  507|Drosophila melanogaster RE27528p pro...    38   0.014
AE014134-3342|AAF53963.1|  507|Drosophila melanogaster CG9253-PA...    38   0.014

>AY121677-1|AAM52004.1|  507|Drosophila melanogaster RE27528p
           protein.
          Length = 507

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 26/90 (28%), Positives = 33/90 (36%)
 Frame = -2

Query: 678 GKXLXFXVXTXXXAMXCAXLFRKLVLXTVPLHCXXFXXIXLPARNXXXSXXXSVMXCXXX 499
           G        T    +  A + R L L  +PLH        L A N   +   S++     
Sbjct: 300 GNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDV 359

Query: 498 ASRXXXXXXXXXXIXMXIXXXSKDYIHRVG 409
           ASR          +   I   SKDYIHRVG
Sbjct: 360 ASRGLDIPHVDVVVNFDIPTHSKDYIHRVG 389


>AE014134-3342|AAF53963.1|  507|Drosophila melanogaster CG9253-PA
           protein.
          Length = 507

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 26/90 (28%), Positives = 33/90 (36%)
 Frame = -2

Query: 678 GKXLXFXVXTXXXAMXCAXLFRKLVLXTVPLHCXXFXXIXLPARNXXXSXXXSVMXCXXX 499
           G        T    +  A + R L L  +PLH        L A N   +   S++     
Sbjct: 300 GNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDV 359

Query: 498 ASRXXXXXXXXXXIXMXIXXXSKDYIHRVG 409
           ASR          +   I   SKDYIHRVG
Sbjct: 360 ASRGLDIPHVDVVVNFDIPTHSKDYIHRVG 389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,273,415
Number of Sequences: 53049
Number of extensions: 134408
Number of successful extensions: 70
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)