Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_C24
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.019
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.019
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.019
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 35 0.078
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 33 0.32
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.42
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.42
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.42
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.97
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.97
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.97
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 1.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 2.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 2.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.9
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.9
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 3.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.9
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.9
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 6.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 6.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 6.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 6.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 6.8
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 28 6.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 6.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 6.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 28 9.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.0
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
GPP PP G PPP PP G P PPP G +G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGGFKG 782
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGK-XXGPRXPPPAKG 516
GPP PP G PPP PP GP PPP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPP--GXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
P T GP PP G PP PPP PP K P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
GPP PP G PPP P GP PPP G
Sbjct: 712 GPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
GPP PP G PPP PP G P PPP G +G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGGFKG 782
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGK-XXGPRXPPPAKG 516
GPP PP G PPP PP GP PPP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPP--GXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
P T GP PP G PP PPP PP K P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
GPP PP G PPP P GP PPP G
Sbjct: 712 GPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
GPP PP G PPP PP G P PPP G +G
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGGFKG 365
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGK-XXGPRXPPPAKG 516
GPP PP G PPP PP GP PPP G
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPP--GXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
P T GP PP G PP PPP PP K P PPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
GPP PP G PPP P GP PPP G
Sbjct: 295 GPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.078
Identities = 29/96 (30%), Positives = 30/96 (31%)
Frame = -1
Query: 662 RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG*MXXIXCX 483
R K G PG P PPP P G GP PP A G G
Sbjct: 121 RPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDG-PAGPPGPPGAPGDAGTNGAPGAP 179
Query: 482 XGXXXQXXAGXAGXPXNXGKXRXXREAAXGQAGDXA 375
G AG G P G E G+ GD A
Sbjct: 180 GGDAPPGEAGPKGPPGPPGSPGAPGE--PGRPGDDA 213
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
P GP+ K GPPG P P PP GK GP PP G G
Sbjct: 145 PAGPPGPQGNKGPL-GPPGPPGPEGPNGTAGNKGPAGPPGPGGKP-GPAGPPGENGRNG 201
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPPR 518
PP P PR +PP P P A +P PP + P PPPPR
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PP---PRAGSPPPPPPPR 304
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
PP P G R PPP PP G PP A G
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
G P PP G PP PP G PPP G
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = -2
Query: 649 PRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
P PP PP +P P A G PPPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPPR 518
PP P PR +PP P P A +P PP + P PPPPR
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PP---PRAGSPPPPPPPR 325
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
PP P G R PPP PP G PP A G
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
G P PP G PP PP G PPP G
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = -2
Query: 649 PRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
P PP PP +P P A G PPPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPPR 518
PP P PR +PP P P A +P PP + P PPPPR
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PP---PRAGSPPPPPPPR 310
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
PP P G R PPP PP G PP A G
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
G P PP G PP PP G PPP G
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = -2
Query: 649 PRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
P PP PP +P P A G PPPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPPR 518
PP PR + P PP PP P P P P PPPPR
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPS-PQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = -1
Query: 665 PRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAK 519
P + P PP PPP PP + PR PPP +
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR 159
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPAT--XEKXXXPGXPPPP 521
PP P + + PP PP P P PP T + P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
PP PR PR PP PP P P PP + E P PP P
Sbjct: 140 PPPPPRVPRTPPPRSP-PPRRPPMTP--PSPQRRPPRTPP-SPEPRNPPRTPPSP 190
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXP-PXXXGKXXGPRXPPPAKG 516
PP PP PPP P P G P PPP G
Sbjct: 471 PPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLG 511
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
PP P APP PP P NP PP PPPP
Sbjct: 471 PPPGPPSSLLPLINTNAPP--PPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPP 523
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
PP P G PP PP GP PPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
P GP K GPPG P P PP GK GP PP G G
Sbjct: 147 PAGPPGPDGNKGPL-GPPGPPGPEGPNGEPGNKGPAGPPGPGGKP-GPAGPPGENGNNG 203
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKG 516
PP PP PPP PP G GP PPP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLG---GPPPPPPPPG 597
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 2/105 (1%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R + G PG P PPP P G P P P +G
Sbjct: 112 PAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGP-QGDA 170
Query: 509 G*MXXIXCXXGXXXQXXAGXAGXPXNXGKXRXXREAAXGQAGDXA 375
G G AG G P G + A GQ G A
Sbjct: 171 GAPGQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDA 213
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 2/105 (1%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R + G PG P PPP P G P P P +G
Sbjct: 112 PAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGP-QGDA 170
Query: 509 G*MXXIXCXXGXXXQXXAGXAGXPXNXGKXRXXREAAXGQAGDXA 375
G G AG G P G + A GQ G A
Sbjct: 171 GAPGQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDA 213
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 2/105 (1%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R + G PG P PPP P G P P P +G
Sbjct: 112 PAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGP-QGDA 170
Query: 509 G*MXXIXCXXGXXXQXXAGXAGXPXNXGKXRXXREAAXGQAGDXA 375
G G AG G P G + A GQ G A
Sbjct: 171 GAPGQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDA 213
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 522 GGGGXPGXXXFSXVAGGXXXGXXXAXXXXGXXGGXXGGAXXRGLFXSWSRGXXGGLXCXX 701
GGGG G + V GG G G GG GG + + G GG C
Sbjct: 76 GGGGYGGGHGGAAVGGGY--GGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQC 133
Query: 702 XP 707
P
Sbjct: 134 SP 135
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
GPPG P PP PP G+ P P P
Sbjct: 262 GPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGP 299
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/92 (29%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG*MXXIXCXXGXXXQ-- 465
G PG P G P P P G+ GP PP G G G +
Sbjct: 128 GMPGNPGKGGSGPCHPVVPTPCKPCPGGR-PGPPGPPGRPGSDGQPGRPATGGGAAPRPG 186
Query: 464 --XXAGXAGXPXNXGKXRXXREAAXGQAGDXA 375
G G P N G R A GQ G+ A
Sbjct: 187 PPGPKGPRGAPGNSG-----RAGAPGQPGNDA 213
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 685 PPXKPRDH--EXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPP 524
PP KP + + P+ APP PP P A P PPA + P PP
Sbjct: 31 PPPKPAPYVEQSAQPQQTAPP--PPPAPYPQQAVPAP-APPPAPYPQHAVPAPAPP 83
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 525 GGGXPGXXXFSXVAGGXXXGXXXAXXXXGXXGGXXGGAXXRGLFXSWSRGXXGG 686
GGG G + GG G G GG GG G F + G GG
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGGGPGGYG-MGGYGGGGGGGGDFGGYGGGGMGG 172
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 522 GGGGXPGXXXFSXVAGGXXXGXXXAXXXXGXXGGXXGGAXXRGLFXSWSRGXXGG 686
GGGG G GG G G GG GG G G GG
Sbjct: 153 GGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG 207
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
G PG P PPP P G GP PP A G G
Sbjct: 126 GTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPG 168
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -1
Query: 653 KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGK--XXGPRXPPPAKGXQG*MXXIXCXX 480
K G PG P G PP P G GP PP G G
Sbjct: 121 KPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 479 GXXXQXXAGXAGXPXNXG 426
G G AG N G
Sbjct: 181 GPGPAGPPGPAGPAGNDG 198
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -1
Query: 653 KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGK--XXGPRXPPPAKGXQG*MXXIXCXX 480
K G PG P G PP P G GP PP G G
Sbjct: 121 KPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 479 GXXXQXXAGXAGXPXNXG 426
G G AG N G
Sbjct: 181 GPGPAGPPGPAGPAGNDG 198
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
G PG P PPP P G GP PP A G G
Sbjct: 121 GTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPG 163
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 20/57 (35%)
Frame = +3
Query: 516 SLGGGGXPGXXXFSXVAGGXXXGXXXAXXXXGXXGGXXGGAXXRGLFXSWSRGXXGG 686
++GGGG + V GG G G GG G + G G GG
Sbjct: 308 AMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGGGG 364
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
G PG P PPP P G GP PP A G G
Sbjct: 128 GQPGVPGKPPTAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPG 170
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -1
Query: 653 KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGK--XXGPRXPPPAKGXQG*MXXIXCXX 480
K G PG P G PP P G GP PP G G
Sbjct: 121 KPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 479 GXXXQXXAGXAGXPXNXG 426
G G AG N G
Sbjct: 181 GPGPAGPPGPAGPAGNDG 198
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
G PG P PPP P G GP PP A G G
Sbjct: 121 GTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPG 163
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -1
Query: 653 KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGK--XXGPRXPPPAKGXQG*MXXIXCXX 480
K G PG P G PP P G GP PP G G
Sbjct: 121 KPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 479 GXXXQXXAGXAGXPXNXG 426
G G AG N G
Sbjct: 181 GPGPAGPPGPAGPAGNDG 198
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG 507
G PG P PPP P G GP PP A G G
Sbjct: 128 GQPGVPGKPPTAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPG 170
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Frame = -1
Query: 653 KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGK--XXGPRXPPPAKGXQG*MXXIXCXX 480
K G PG G PPP P G GP P G G
Sbjct: 136 KPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPS 195
Query: 479 GXXXQXXAGXAGXPXNXGK 423
G G AG P N G+
Sbjct: 196 GPGPAGPPGPAGPPGNDGQ 214
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPA--TXEKXXXPGXPPPPRXX 512
PP P P P P P P PP T PG PPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 511 R 509
R
Sbjct: 324 R 324
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
PP PP PPP PP P PPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = -1
Query: 638 GPPGX----PPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
GPPG PP PPP PP G PPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPA--TXEKXXXPGXPPPPRXX 512
PP P P P P P P PP T PG PPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 511 R 509
R
Sbjct: 334 R 334
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 635 PPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
PP PP PPP PP P PPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = -1
Query: 638 GPPGX----PPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPP 525
GPPG PP PPP PP G PPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 PXXTXGPRXE--KXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P GP E + GPPG P PP P GP PP +G
Sbjct: 102 PPGPPGPPGEPGQPGSAGPPGPPGEDNTATFAPITCPPKDPSCVKCPEGPAGPPGPEGPA 161
Query: 509 G 507
G
Sbjct: 162 G 162
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 683 PXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPA 522
P GP+ G PG P G PPP P P PPPA
Sbjct: 717 PPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPY----GYPPGAPPPA 766
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPP--XXXGKXXGPRXPPPAKG 516
P GP R + G PG P PPP PP GP PP KG
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKG 171
Query: 515 XQG 507
G
Sbjct: 172 LPG 174
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R K G PG P PPP P G GP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQG-PPGPPGPPGPPGDS 165
Query: 509 G 507
G
Sbjct: 166 G 166
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 522 GGGGXPGXXXFSXVAGGXXXGXXXAXXXXGXXGGXXGGAXXRGLFXSWSRGXXGG 686
GGGG G GG G G GG GG RG F RG G
Sbjct: 326 GGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGG--DRGGFRGGDRGGDRG 378
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R K G PG P PPP P G GP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQG-PPGPPGPPGPPGDS 165
Query: 509 G 507
G
Sbjct: 166 G 166
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R K G PG P PPP P G GP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQG-PPGPPGPPGPPGDS 165
Query: 509 G 507
G
Sbjct: 166 G 166
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = -2
Query: 649 PRXXAPPXXPPXXPXXXXAXXNPXXXPP---ATXEKXXXPG 536
PR APP PP P + P PP + EK PG
Sbjct: 24 PREGAPPPAPPLAPGASTSQAPPPLQPPPVIESAEKFYVPG 64
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = -2
Query: 634 PPXXPPXXPXXXXAXXNPXXXPPATXEK----XXXPGXPPPP 521
PP PP P P PP T K P PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 638 GPPGXP-PXGXXXXXRXXXP-PPXPPXXXGKXXGPRXP 531
GPPG P G + P PP PP G+ GP P
Sbjct: 258 GPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQP 295
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -1
Query: 707 GXXXAXKTPXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPP 528
G + TP T P P P PPP PP P PP
Sbjct: 451 GTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
Query: 527 P 525
P
Sbjct: 511 P 511
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/87 (26%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = -1
Query: 638 GPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQG*MXXIXCXXG-XXXQX 462
G PG P G PP P G+ GP P G G + + G
Sbjct: 190 GAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNP----GAPGAVTEVPGQQGPPGPPG 245
Query: 461 XAGXAGXPXNXGKXRXXREAAXGQAGD 381
AG G N G+ + G GD
Sbjct: 246 PAGPPGPAGNAGQAGYAQPGPAGPPGD 272
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -1
Query: 707 GXXXAXKTPXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPP 528
G + TP T P P P PPP PP P PP
Sbjct: 458 GPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
Query: 527 P 525
P
Sbjct: 518 P 518
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/74 (25%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Frame = -1
Query: 743 EXXXTXXXXXPXGXXXAXKTPXXTXGPRXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPX 564
E T P G P P + GPPG P P PP
Sbjct: 250 EVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPG 309
Query: 563 XXGKXXG-PRXPPP 525
G G PPP
Sbjct: 310 QPGAGGGCDHCPPP 323
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = -2
Query: 685 PPXKPRDHEXKXPRXXAPPXXPPXXPXXXXAXXNPXXXPPATXEKXXXPGXPPPP 521
PP P P P PP P P PP + P PPPP
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFD----PNKPPPP 745
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 683 PXXTXGP--RXEKXXXXGPPGXPPXGXXXXXRXXXPPPXPPXXXGKXXGPRXPPPAKGXQ 510
P T G R K G PG P PPP P G GP PP G
Sbjct: 112 PAGTPGKPGRPGKAGAPGLPGNPGRPPQQPCEPITPPPCKPCPQG-PAGPPGPPGPAGDA 170
Query: 509 G 507
G
Sbjct: 171 G 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,870,274
Number of Sequences: 27780
Number of extensions: 178362
Number of successful extensions: 1348
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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