Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_C18
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.1
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.1
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.1
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 271 GGXGTPPXKXGGXPPPPXXKKXPPXKKXPPG 363
GG PP GG PPPP PP P G
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 285 PPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPPXFXXXPP 434
PP G P PP P PP + PPP F PP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 270 GGXGDPPXKXGGPPXPPXPXKXXPPXKXPP 359
GG PP GG P PP P PP PP
Sbjct: 92 GGIPPPPPMMGGIP-PPPPMFGAPPPPPPP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 273 GXGDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP 413
G PP + G PP PP P P PP PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP + G PPPP + PP PP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPPG 363
G PP G PPPP K+ P + P G
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPPXXXXXXP 456
G+PP G PPPP PP PP PP PPP P
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPP----PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 273 GXGDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP 413
G PP + G PP PP P P PP PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP + G PPPP + PP PP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPPG 363
G PP G PPPP K+ P + P G
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPPXXXXXXP 456
G+PP G PPPP PP PP PP PPP P
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPP----PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 273 GXGDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP 413
G PP + G PP PP P P PP PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP + G PPPP + PP PP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 274 GXGTPPXKXGGXPPPPXXKKXPPXKKXPPG 363
G PP G PPPP K+ P + P G
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPPXXXXXXP 456
G+PP G PPPP PP PP PP PPP P
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPP----PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPP 359
G PP G PP PP P PP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 270 GGXGDPPXKXGG-----PPXPPXPXKXXPPXKXPPRXF 368
GG PP GG PP PP K PP PP F
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP G PPPP PP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 271 GGXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
GG PP GG PPPP K PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP-XFXXXPP 434
G P GGPP PP P P PP PPP F PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = +3
Query: 270 GGXGDPPXK------XGGPPXPPXPXKXXPPXKXPP 359
GG PP GGPP PP P PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPP 435
G PP GG PPPP PP PP PP+ PPP
Sbjct: 718 GLPPIT-GGPPPPPPPGGLPPITGGPPPPPPPGG-------LPPISGGPPPP 761
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 GGXGDPPXKXGGPPXPP--XPXKXXPPXKXPP 359
GG P GGPP PP P PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPP 359
G PP G PP PP P PP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 270 GGXGDPPXKXGG-----PPXPPXPXKXXPPXKXPPRXF 368
GG PP GG PP PP K PP PP F
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP G PPPP PP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 271 GGXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
GG PP GG PPPP K PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP-XFXXXPP 434
G P GGPP PP P P PP PPP F PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = +3
Query: 270 GGXGDPPXK------XGGPPXPPXPXKXXPPXKXPP 359
GG PP GGPP PP P PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPP 435
G PP GG PPPP PP PP PP+ PPP
Sbjct: 718 GLPPIT-GGPPPPPPPGGLPPITGGPPPPPPPGG-------LPPISGGPPPP 761
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 GGXGDPPXKXGGPPXPP--XPXKXXPPXKXPP 359
GG P GGPP PP P PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPP 359
G PP G PP PP P PP PP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 270 GGXGDPPXKXGG-----PPXPPXPXKXXPPXKXPPRXF 368
GG PP GG PP PP K PP PP F
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPP 360
G PP G PPPP PP PP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 271 GGXGTPPXKXGGXPPPPXXKKXPPXKKXPP 360
GG PP GG PPPP K PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 GDPPXKXGGPPXPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPP-XFXXXPP 434
G P GGPP PP P P PP PPP F PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = +3
Query: 270 GGXGDPPXK------XGGPPXPPXPXKXXPPXKXPP 359
GG PP GGPP PP P PP PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 280 GTPPXKXGGXPPPPXXKKXPPXKKXPPGXXXXXXXXXXL*KTPPLXXXXPPP 435
G PP GG PPPP PP PP PP+ PPP
Sbjct: 301 GLPPIT-GGPPPPPPPGGLPPITGGPPPPPPPGG-------LPPISGGPPPP 344
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 GGXGDPPXKXGGPPXPP--XPXKXXPPXKXPP 359
GG P GGPP PP P PP PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 285 PPXKXGGPPXPPXPXKXXPPXK-XPPRXFXXXXXXXXXVKNPPPXF 419
PP G PP PP P PP + PP F K PPP F
Sbjct: 709 PPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPN-------KPPPPMF 747
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 15 GSNEKAXGXXRLSLWGPP-PKGNFXXKTGPGNXGKXXXPNFG 137
G++E + G + GPP P G PGN G+ P+FG
Sbjct: 173 GASEGSAGGCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFG 214
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 286 PPXKXGGXPPPPXXKKXPPXKKXPPG 363
PP GG PPPP PP PPG
Sbjct: 782 PPRLQGGIPPPPPLGIIPP--PPPPG 805
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 271 GGXGTPPXKXGGXPPPPXXKKXPPXKKXPPG 363
G G P G PP P PP + PPG
Sbjct: 210 GPTGEPGKVINGAPPGPPGPPGPPGPQGPPG 240
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 270 GGXGDPPXKXGGPPXPP---XPXKXXPPXKXPP 359
G G P + GPP PP P PP + PP
Sbjct: 248 GPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 314 PPPPXKKXPPXKXPPP 361
PPPP + PP + PPP
Sbjct: 150 PPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 314 PPPPXKKXPPXKXPPP 361
PPPP + PP + PPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 314 PPPPXKKXPPXKXPPP 361
PPPP + PP + PPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 GDPPXKXGGPP-XPPXPXKXXPPXKXPPRXFXXXXXXXXXVKNPPPXFXXXPP 434
G PP PP P P PP PP+ PPP PP
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 314 PPPPXKKXPPXKXPPP 361
PPPP + PP + PPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 286 PPXKXGGXPPPPXXKKXPPXKKXPPG 363
PP GG PPPP PP PPG
Sbjct: 782 PPRLQGGIPPPPPLGIIPP--PPPPG 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,094,135
Number of Sequences: 27780
Number of extensions: 210269
Number of successful extensions: 1809
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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