Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_C12
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 31 0.87
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 2.6
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 2.6
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 28 6.1
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 6.1
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 6.1
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPS 543
P PP PG+S +P +PP DL SI P P F+ PPL + P+
Sbjct: 668 PSIYPPPPPGVSLNQLPPRVPVPIIRPPNDLQ--SIEPKVPLKPNFSIP-PPPLPAPPPT 724
Query: 542 AYLT 531
T
Sbjct: 725 TIST 728
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISINPLTPX*KEFAPGLKPP--LSSEA 549
P P P +G + +P PPP +S+N L P + P ++PP L S
Sbjct: 648 PFSSPQPVPRFNGPPSSFILPSIYPPPPP---GVSLNQLPP--RVPVPIIRPPNDLQSIE 702
Query: 548 PSAYLTPS-SLGMAKGVSPPYFQVNDESQASRLISRHSTHT 429
P L P+ S+ +PP ++ + + +S +T T
Sbjct: 703 PKVPLKPNFSIPPPPLPAPPPTTISTTTVIAGPVSAEATST 743
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPS 543
P PP PG+S +P +PP DL SI P P F+ PPL + P+
Sbjct: 668 PSIYPPPPPGVSLNQLPPRVPVPIIRPPNDLQ--SIEPKVPLKPNFSIP-PPPLPAPPPT 724
Query: 542 AYLT 531
T
Sbjct: 725 TIST 728
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISINPLTPX*KEFAPGLKPP--LSSEA 549
P P P +G + +P PPP +S+N L P + P ++PP L S
Sbjct: 648 PFSSPQPVPRFNGPPSSFILPSIYPPPPP---GVSLNQLPP--RVPVPIIRPPNDLQSIE 702
Query: 548 PSAYLTPS-SLGMAKGVSPPYFQVNDESQASRLISRHSTHT 429
P L P+ S+ +PP ++ + + +S +T T
Sbjct: 703 PKVPLKPNFSIPPPPLPAPPPTTISTTTVIAGPVSAEATST 743
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISI--NPLTPX*KEFAPGLKPPLSSEA 549
P KPP + S S IP PPP I NP+ + P+++EA
Sbjct: 1157 PNLVKPPPVQVVAPSP-SVIPPPILPPPPPAGVIGQQRNPI-------GGARQVPVAAEA 1208
Query: 548 PSAYLTPSSLGMAKGVSPP 492
P+A PS + +G SPP
Sbjct: 1209 PAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 722 PLXXKPPSPGISGTSTRSSIPDSXHQPPPDLTSISI--NPLTPX*KEFAPGLKPPLSSEA 549
P KPP + S S IP PPP I NP+ + P+++EA
Sbjct: 1157 PNLVKPPPVQVVAPSP-SVIPPPILPPPPPAGVIGQQRNPI-------GGARQVPVAAEA 1208
Query: 548 PSAYLTPSSLGMAKGVSPP 492
P+A PS + +G SPP
Sbjct: 1209 PAAAAAPSRARVPRGPSPP 1227
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Frame = -1
Query: 662 PDSXHQPPPDLTSISINPLTPX*KEFAPGLK-PPLSSEAPSAYLTPSSL--GMAKGVSPP 492
PD P P + + P P E + +E P +TP A V
Sbjct: 825 PDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKPKTEVTPKPAHKSAASKVDAT 884
Query: 491 YFQVNDESQASRLISRHSTHT 429
+ D+S A IS+ THT
Sbjct: 885 NTKTEDQSSAQNCISQSMTHT 905
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -1
Query: 707 PPSPGISGTST----RSSIPDSXHQPPPDLTSISINPLT 603
P S ISG ST ++++P + P P T+I++ P+T
Sbjct: 77 PTSQDISGVSTAPTTKATLPPITYPPAPTTTTINLAPIT 115
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 656 SXHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQ 483
S +QP +TS + +P+TP A ++ +PSA T S++ A V P Q
Sbjct: 45 SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAALVVPTTLQ 102
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 656 SXHQPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQ 483
S +QP +TS + +P+TP A ++ +PSA T S++ A V P Q
Sbjct: 45 SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAALVVPTTLQ 102
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 707 PPSPGISGTSTRSSIPDSXHQPPP 636
PP P +S +S SS+P H PPP
Sbjct: 823 PPKPQVSTSSRMSSVPS--HPPPP 844
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 707 PPSPGISGTSTRSSIPDSXHQPPP 636
PP P +S +S SS+P H PPP
Sbjct: 823 PPKPQVSTSSRMSSVPS--HPPPP 844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,016,817
Number of Sequences: 27780
Number of extensions: 340772
Number of successful extensions: 1074
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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