BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_C04
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 33 1.2
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 33 1.2
BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein. 32 2.1
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 32 2.1
AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific prot... 32 2.1
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 32 2.1
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 32 2.7
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 31 3.6
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 31 3.6
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 31 3.6
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 31 3.6
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 4.8
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 31 4.8
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 6.3
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 6.3
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPX---XPPXPXPXXXXXXXXPXXXPX 725
P P P P PL P P PPPP PP P P P P
Sbjct: 108 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPA 167
Query: 726 XXXXXXPPXP 755
P P
Sbjct: 168 APSPEDPELP 177
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXP 683
P P P P P P PPPP PP P P
Sbjct: 101 PTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPP 143
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPX---XPPXPXPXXXXXXXXPXXXPX 725
P P P P PL P P PPPP PP P P P P
Sbjct: 653 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPA 712
Query: 726 XXXXXXPPXP 755
P P
Sbjct: 713 APSPEDPELP 722
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXP 683
P P P P P P PPPP PP P P
Sbjct: 646 PTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPP 688
>BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein.
Length = 308
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXP 683
P P P P + LS P P PPPP PP P P
Sbjct: 104 PRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPP--PPAPRP 144
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXX 734
P P P P P + P PPPP PP P P P P
Sbjct: 441 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPP--PPPPPPPLPGPAAET 498
Query: 735 XXXPPXPXXXXXXXPXP 785
PP P P
Sbjct: 499 VPAPPLAPPLPSAPPLP 515
>AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific
proteinase 51 protein.
Length = 711
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXP 683
P P P P + LS P P PPPP PP P P
Sbjct: 104 PRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPP--PPAPRP 144
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXX 734
P P P P P + P PPPP PP P P P P
Sbjct: 544 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPP--PPPPPPPLPGPASET 601
Query: 735 XXXPPXPXXXXXXXPXP 785
PP P P
Sbjct: 602 VPAPPLAPPLPSAPPLP 618
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXP 677
P P P R P S P P PPPP PP P
Sbjct: 143 PRPLPPRPPAAQPRPPPSPPPPPPPPPSPLPPPPPPPPPTP 183
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 633 PXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXXXXXPPXPXXXXXXXPXP 785
P PPPP P P P P P PP P P P
Sbjct: 120 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPP 170
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 633 PXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXXXXXPPXPXXXXXXXPXP 785
P PPPP P P P P P PP P P P
Sbjct: 538 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPP 588
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 633 PXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXXXXXPPXPXXXXXXXPXP 785
P PPPP P P P P P PP P P P
Sbjct: 429 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPP 479
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 633 PXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXXXXXPPXPXXXXXXXPXP 785
P PP P PP P P P P PP P P P
Sbjct: 957 PPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPP 1007
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.1 bits (67), Expect = 4.8
Identities = 19/72 (26%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPX-----XPPXPXPXXXXXXXXPXXX 719
P P P P + P P PPPP PP P P P
Sbjct: 45 PGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPP 104
Query: 720 PXXXXXXXPPXP 755
P PP P
Sbjct: 105 PPLYQRVSPPQP 116
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXX---PXXXXPPPPXXPPXPXP 683
P P P P PL P P PPPP PP P P
Sbjct: 609 PPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPP 654
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 600 PLSXPXXXXXXPXXXXPPPPXXPPXPXP 683
PL P P PPPP PP P P
Sbjct: 1989 PLQAPPPTPPPPPPPPPPPPPPPPPPPP 2016
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +3
Query: 555 PXPNPXPXXXXXXRXPLSXPXXXXXXPXXXXPPPPXXPPXPXPXXXXXXXXPXXXPXXXX 734
P P P P P P PPPP PP P P P
Sbjct: 301 PPPPPLPSGLGSLSPAPPMPPVSAGPPL---PPPPPPPPPLPPPSSAGPPPPPPPPPLPN 357
Query: 735 XXXPPXPXXXXXXXPXP 785
PP P P P
Sbjct: 358 SPAPPNPGGPPPAPPPP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,948,832
Number of Sequences: 237096
Number of extensions: 967185
Number of successful extensions: 7911
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5613
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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