Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_C02
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot...    31   7.1  
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.           31   7.1  
X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing f...    30   9.4  
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    30   9.4  
BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.         30   9.4  
AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor proline...    30   9.4  
AL353637-4|CAH70683.1|  432|Homo sapiens forkhead box B2 protein.      30   9.4  

>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
           protein.
          Length = 3144

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
 Frame = +3

Query: 702 PXXPPXXPPXPHXTXXXXQ-KPXXPSXXXPXXPPPXQP 812
           P  PP  PP P       Q +P  P    P  PPP  P
Sbjct: 41  PPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPP 78


>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
          Length = 3144

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
 Frame = +3

Query: 702 PXXPPXXPPXPHXTXXXXQ-KPXXPSXXXPXXPPPXQP 812
           P  PP  PP P       Q +P  P    P  PPP  P
Sbjct: 41  PPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPP 78


>X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing
           factor protein.
          Length = 707

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 711 PPXXPPXPHXTXXXXQKPXXPSXXXPXXPPPXQP 812
           PP  PP PH      Q+   P    P  PPP QP
Sbjct: 58  PPIPPPPPH----QQQQQPPPQQPPPQQPPPHQP 87


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 711 PPXXPPXPHXTXXXXQKPXXPSXXXPXXPPPXQP 812
           PP  PP PH      Q+   P    P  PPP QP
Sbjct: 58  PPIPPPPPH----QQQQQPPPQQPPPQQPPPHQP 87


>BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.
          Length = 525

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 711 PPXXPPXPHXTXXXXQKPXXPSXXXPXXPPPXQP 812
           PP  PP PH      Q+   P    P  PPP QP
Sbjct: 58  PPIPPPPPH----QQQQQPPPQQPPPQQPPPHQP 87


>AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 711 PPXXPPXPHXTXXXXQKPXXPSXXXPXXPPPXQP 812
           PP  PP PH      Q+   P    P  PPP QP
Sbjct: 58  PPIPPPPPH----QQQQQPPPQQPPPQQPPPHQP 87


>AL353637-4|CAH70683.1|  432|Homo sapiens forkhead box B2 protein.
          Length = 432

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +3

Query: 711 PPXXPPXPHXTXXXXQKPXXPSXXXPXXP--PPXQP 812
           PP  PP PH      Q+P       P  P  PP QP
Sbjct: 167 PPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.143    0.503 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,819,476
Number of Sequences: 237096
Number of extensions: 1307553
Number of successful extensions: 4803
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4164
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)