Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_B20
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    31   0.88 
AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical...    25   2.0  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    30   2.0  
U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (gr...    29   3.6  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 352 PXPTPPPPQXPXPXXPTPXXXP 417
           P P PPPP  P P  P P   P
Sbjct: 65  PPPPPPPPMCPPPPPPMPSYSP 86


>AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical
           protein Y116A8C.35 protein.
          Length = 285

 Score = 25.0 bits (52), Expect(2) = 2.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 416 GXXXGVGXXGXGXWGGGGVG 357
           G   G G    G WGGGG G
Sbjct: 220 GGGGGGGYGSGGGWGGGGGG 239



 Score = 23.4 bits (48), Expect(2) = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 383 GXWGGGGVGXG 351
           G WGGGG G G
Sbjct: 245 GGWGGGGGGRG 255


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 352 PXPTPPPPQXPXPXXPTPXXXP 417
           P P PPPP+ P P  PTP   P
Sbjct: 546 PTP-PPPPREPTPREPTPEPEP 566


>U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (grd
           related) protein 6 protein.
          Length = 240

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 358 PTPPPPQXPXPXXPTPXXXPXTXXAXXXXSGXPS 459
           P PPPP  P P  P P   P         S  PS
Sbjct: 72  PPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPS 105


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 352 PXPTPPPPQXPXPXXPTPXXXPXTXXA 432
           P P PPPP  P P  P     P +  A
Sbjct: 2   PPPPPPPPPPPPPPPPAASAPPPSSNA 28


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 352 PXPTPPPPQXPXPXXPTPXXXPXTXXA 432
           P P PPPP  P P  P     P +  A
Sbjct: 2   PPPPPPPPPPPPPPPPAASAPPPSSNA 28


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +1

Query: 352 PXPTPPP--PQXPXPXXPTPXXXPXT 423
           P P PPP  P+ P P  P P   P T
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMT 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,586,729
Number of Sequences: 27780
Number of extensions: 82966
Number of successful extensions: 1185
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)