Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_B19
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.97 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 531  GELPVPRRPLTPCPGXSXRTCGVCRR 454
            G +  P R L P PG +  TC   +R
Sbjct: 1644 GYIAPPNRKLPPVPGSNYNTCDRIKR 1669


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 91  SILISNAAVCSSRFVLSAGVYWRVAR 168
           ++LI+   +CSS     A V+WR  R
Sbjct: 164 AVLIAIVWICSSAISFPAIVWWRAVR 189


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -2

Query: 198 YPTNRSLCYRPSNAPVY--SC*KNKSRRAHSSV 106
           YPTNRSL  R     +Y     ++K RRA   +
Sbjct: 131 YPTNRSLFIREQTEEMYREMLLEHKKRRARRDI 163



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 606 KSPXXPPQPRXNKSXSV 556
           +SP  PP PR   S S+
Sbjct: 208 QSPLCPPAPRLTNSNSI 224



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 295 REAFAVAVSAGFVDRLNAPSDPGCTVEHWP 384
           +E +  +V +G +DRL+  +DP C V ++P
Sbjct: 698 KEGYLHSVVSGALDRLHYETDP-C-VRYYP 725


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 504 LTPCPGXSXRTCGVCRRSPRTQYR 433
           LTP P  +    G C  +  T YR
Sbjct: 109 LTPYPNWAQNKAGACGSAITTAYR 132


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 397 RDPRLANAPPYNPDPRVRSSDP 332
           R+P LA A PYN    V S  P
Sbjct: 885 RNPALALAEPYNQRGTVVSPPP 906


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 397 RDPRLANAPPYNPDPRVRSSDP 332
           R+P LA A PYN    V S  P
Sbjct: 923 RNPALALAEPYNQRGTVVSPPP 944


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,955
Number of Sequences: 438
Number of extensions: 3891
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)