Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_B14
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.020
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.56
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.98
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 27 2.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.020
Identities = 18/72 (25%), Positives = 21/72 (29%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGAXLP 723
PP P ++ P P + PP P PPP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 724 AXXPXPXXXPXP 759
P P P P
Sbjct: 792 YYAPAPQAEPEP 803
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 685 PPAV--PXXPGAXLPAXXPXPXXXPXPXPPXP 774
PPAV P A +P P P P PP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.026
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGAXLP 723
PP + P PP P PP S A+ + P P PG P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 724 AXXPXPXXXPXPXPPXP 774
A P PP P
Sbjct: 402 ALPPLGNASRTSTPPVP 418
Score = 31.9 bits (69), Expect = 0.10
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXP-PPTXPXSXALQSEPPAVPXXPGAXL 720
PP P +L P PP P PP+ P + L + PA P P A
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA-- 472
Query: 721 PAXXPXPXXXPXPXPP 768
A P P P P P
Sbjct: 473 -APAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 0.98
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 607 PPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGAXLPAXXPXPXXXPXPXPP 768
PP PPP P S S PP P P A + P PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/60 (26%), Positives = 18/60 (30%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGAXLP 723
PP P P + PP P PP P + PA P A LP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 643 PPPTXPXSXALQSEPPAVPXXPGAXLPAXXPXPXXXPXPXPPXP 774
PPP P S + +PP + LP P P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.56
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +1
Query: 580 PXPXXXXLXPPXPXXXXXXXXPPPTX--PXSXALQSEPPAVPXXPGAXLPAXXPXPXXXP 753
P P PP P P P+ P A S P VP P A +P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPP 1199
Query: 754 XPXP 765
P P
Sbjct: 1200 VPKP 1203
Score = 28.7 bits (61), Expect = 0.98
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGA-XL 720
PP P T P P PP P PP P A SE P++P GA +
Sbjct: 1032 PPIPVPSTAPPVPIPTST---PPVPKSSSGAPSAPPPVP---APSSEIPSIPAPSGAPPV 1085
Query: 721 PAXXPXPXXXPXPXP 765
PA P P P P
Sbjct: 1086 PAPSGIP---PVPKP 1097
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 0.98
Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = +1
Query: 544 PPHPXXXTLLRXPX--PXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGAX 717
P P + LR P P + PP P P P S PPA P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSL----PPPAQPAAPVKS 183
Query: 718 LPAXXPXPXXXPXPXPP 768
P+ P P P PP
Sbjct: 184 PPSAPSLPSAVP-PMPP 199
Score = 26.6 bits (56), Expect = 3.9
Identities = 20/74 (27%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXPGA--X 717
PP P P PP P PPP P + PP+ P P A
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSL-----PPPAQPAAPV--KSPPSAPSLPSAVPP 196
Query: 718 LPAXXPXPXXXPXP 759
+P P P P
Sbjct: 197 MPPKVPPPPLSQAP 210
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 318 LRSLISNLSNTCDLTPLPEWSCERSAW 238
+RS+ L D+TP+ +W +RS W
Sbjct: 109 VRSIEQELEQLRDVTPINQWKRKRSLW 135
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/55 (25%), Positives = 20/55 (36%)
Frame = +1
Query: 544 PPHPXXXTLLRXPXPXXXXLXPPXPXXXXXXXXPPPTXPXSXALQSEPPAVPXXP 708
P HP +R + P P PPP+ P + + PP+ P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP---PMPAGPPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = -3
Query: 773 GXGGXGX--GXXXGXGXXAGSXAPGXXGTAGGSDWRAXXXGXVGGGXXXXXXXXGXGG 606
G GG G G G G G G G GG G GGG G G
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 649 PTXPXSXALQSEPPAVPXXPGAXLPAXX-PXPXXXPXPXPPXP 774
PT ++ S PP+ P A PA P P P PP P
Sbjct: 156 PTVSAPNSMVSPPPSFQP-PSAAAPATSLPSDYNPPPPPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,438,564
Number of Sequences: 5004
Number of extensions: 16448
Number of successful extensions: 110
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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